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Table 1 Novel miRviewer identified human mature miRNAs discovered using deep sequencing

From: miRviewer: a multispecies microRNA homologous viewer

miRNA Name

Hela

SupT1

Total

Mature Sequence

Seed

Conserved Targets

Conserved Sites

hsa-miR-365-1*

407

901

1308

ACCGAUUUCAAAUGGUGCUA

CCGAUUU

9

9

hsa-miR-652*

180

135

315

GCCCUUUUAACAUUGCACUG

CCCUUUU

486

521

hsa-miR-664b

131

98

229

AACACCAUUGUCACACUCCA

ACACCAU

195

204

hsa-miR-301a*

79

27

106

CAACCCUAGGAGAGGGUGCCAUUC

AACCCUA

70

72

hsa-miR-513a

0

65

65

AGGGGUUCACCGAGCAACAUUCG

GGGGUUC

88

110

hsa-miR-128-1*

21

37

58

ACGGGUAUUCUUGGGUGGAUAA

CGGGUAU

2

2

hsa-miR-152*

23

0

23

GGAAACAUUUCUGCACAAACUAG

GAAACAU

360

375

hsa-miR-1249*

1

20

21

GCUGGUAAAAUGGAACCAAA

CUGGUAA

146

151

hsa-miR-103-1*

13

4

17

GGCUUCUUUACAGUGCUGCCUUG

GCUUCUU

392

412

hsa-miR-2145

12

4

16

GCGACGAGCCCCUCGCACAAACC

CGACGAG

1

1

hsa-miR-107*

1

14

15

AGCUUCUUUACAGUGUUGCCUUG

GCUUCUU

392

412

hsa-miR-203*

11

0

11

GUGGAUAUUCCUUCUAUGUUUA

UGGAUAU

116

119

  1. * refers to the minor miRNA isoform (based on miRbase)