Skip to main content

Table 1 Genetic loci screened in this study

From: Genome skimming identifies polymorphism in tern populations and species

Name Chromosome Function Source
ACL (16) 27 ATP citrate lyase [44]
AK1 (4-5) 17 Adenylate kinase 1 [44]
ALAS1 (8) 12 5-aminolevulinate synthase [45]
AXIN (7) 14 Axin [44]
BFIB* (7) 4 Beta-fibrinogen [46]
BZW1 (6) 7 Basic Leucine Zipper Gene 1 This study
Brahma (15) Z Brahma/SMARCA-2 [45]
CEPU* (1) 24 CEPU/Neurotrimin [44]
COI MT Cytochrome Oxidase I [47]
CRMIL (14) 1 V-raf murine sarcoma viral oncogene [44]
ENOL* (8) 21 Alpha-enolase [48]
G3PDH (11) 1 Glyceraldehyde-3-phosphodehydrogenase [49]
GAPDH (4) 1 Glyceraldehyde-3-phosphodehydrogenase [50]
Lamin (3) 28 Lamin-A [48]
Control Region MT D-loop of mitochondrial control region This study, [11, 51]
MPP (4) 4 Myelin proteolipid protein [45]
MYO* (2) 1 Myoglobin [52]
ODC (6-7) 10 Ornithine decarboxylase [53]
P40 (5) 2 Laminin receptor precursor P40 [44]
R35* 9 G-protein coupled receptor R35, exon1 This study
RGS4 (3) 8 Regulator G-protein signaling 4 [44]
VIM (7) 2 Vimentin [44]
16S MT 16S rRNA (L2724-H3292) [54]
3399 9 Pleckstrin homology domain-containing B2 [4]
3862 14 WD repeat protein 24 [4]
12884 1 Dihydrolipoamide dehydrogenase [4]
13336* 10 Eukaryotic translation initiation factor 3-1α [4]
16264 3 Postsynaptic protein CRIPT [4]
17483 4 High mobility group protein B2 [4]
20352 2 Unknown [4]
21277* 2 Unknown [4]
21281 5 Vacuolar H+ ATPase E1 [4]
21571 1 Unknown [4]
24813 1 Unknown [4]
25149 4 Carboxypeptidase Z precursor [4]
25442* 6 Ubiquitin-conjugating enzyme E2, J1 [4]
26187 1 ATPase, lysosomal accessory protein 2 [4]
27270 1 Phosphoglycerate dehydrogenase-like 1 [4]
27331* 1 Unknown [4]
  1. Each locus is shown with intron number in parentheses, chromosome location, gene function and source. Loci in bold are used in this paper for phylogenetic and/or population genetic analyses. Loci with an asterisk did not amplify or sequence consistently across species or showed non-specific priming problems