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Table 1 Protein groups ( n = 58) newly identified in Taenia solium metacestode excretion/secretion proteins, organized by Gene Ontology annotation information on biological processes and molecular functions

From: Use of expressed sequence tags as an alternative approach for the identification of Taenia solium metacestode excretion/secretion proteins

Gene ontology classification Closest organism gi code Proteinsa) ESTsb)
  Protein group     
1) No Gene Ontology classification
  Major egg antigen Clonorchis sinensis 358336515 1 2
  ES1 protein homolog Multiplec) - 3 5
  Phosphoglyceride transfer protein Taenia asiatica 124782980 1 7
  Alpha-2-macroglobulin-like protein 1 Clonorchis sinensis 358333571 1 5
  Aldose 1-epimerase Clonorchis sinensis 358334888 1 2
  SJCHGC02626 protein Schistosoma japonicum - 3 7
  Hypothetical protein Schistosoma mansoni 256079415 1 4
  TSP1 Echinococcus multilocularis 209967595 1 4
  Putative major vault protein Echinococcus granulosus 62178032 1 2
2) Binding (miscellaneous)  
  Filamin Multiple - 3 7
  Methionyl-tRNA synthetase cytoplasmic Clonorchis sinensis 358255967 1 5
  SJCHGC09631 protein Schistosoma spp. - 2 2
  four and a half LIM domains protein 3 Clonorchis sinensis 358341124 1 7
  Alpha-actinin isoform B Taenia asiatica 124783372 1 3
  Calumenin Taenia asiatica 124784033 1 2
  Calcium-binding protein Schistosoma mansoni 256071353 1 2
  Lysyl oxidase-like Schistosoma mansoni 256072781 1 2
  Porphobilinogen synthase Multiple - 3 3
  Phosphoglucomutase-1 Clonorchis sinensis 358337844 1 2
  Fibrillar collagen Multiple - 9 16
3) Glycolysis/Metabolic processes (miscellaneous)  
  Adenylosuccinate synthetase Schistosoma mansoni 387912858 1 4
  Adenylate kinase Multiple - 2 4
  UDP-glucose pyrophosphorylase 2 Schistosoma spp. - 2 2
  Hypothetical protein SINV_09109 Solenopsis invicta 322793762 1 2
  Aspartate aminotransferase Multiple - 3 5
  Lactate dehydrogenase A Taenia solium 318054471 1 6
  SJCHGC05968 protein Multiple - 2 2
  Methylthioadenosine phosphorylase Multiple - 2 2
  Ornithine aminotransferase Multiple - 3 3
  Endoglycoceramidase Multiple - 3 3
  Aminoacylase Multiple - 2 2
  Glucose-6-phosphate 1-dehydrogenase-like Sus scrofa 350595984 1 2
  Phosphoglycerate mutase Multiple - 3 7
4) (Endo)peptidase activity  
  Calpain Multiple - 5 5
  UDP-glucose 4-epimerase Multiple - 2 2
  Dipeptidyl-peptidase Multiple - 2 3
  Glutamate carboxypeptidase 2 Clonorchis sinensis 358331956 1 3
5) Endopeptidase inhibitor activity
  Kunitz protein 8 Multiple - 2 3
6) Cell redox homeostasis/Oxidation-reduction related  
  Carbonyl reductase Schistosoma spp. - 3 3
  Methionine sulfoxide reductase Multiple - 2 4
  procollagen-lysine, 2-oxoglutarate Multiple - 3 6
  5-dioxygenase 3     
7) Transport  
  Charged multivesicular body protein Multiplec) - 3 4
  SJCHGC06082 protein Multiple - 2 8
  Glycolipid transfer protein-like protein Taenia asiatica 124782916 1 2
  Gamma-soluble NSF attachment protein Multiple - 4 10
  Sodium/glucose cotransporter Multiple - 2 7
8) Motor activity/Cytoskeleton and Microtubule related  
  Tubulin polymerization-promoting protein Multiple - 2 2
  Myophilin Multiple - 2 19
9) Miscellaneous Gene Ontology classification  
  Translation initiation factor 5A Multiple - 2 4
  Ubiquitin-conjugating enzyme Multiple - 4 10
  Protein-l-isoaspartate o-methyltransferase Schistosoma mansoni 256081696 1 2
  Protein DJ-1-like Multiple - 2 4
  6-phosphogluconolactonase Multiple - 2 4
  SJCHGC02435 protein Schistosoma japonicum 56756018 1 5
  Family T2 unassigned peptidase Schistosoma mansoni 256088374 1 4
  3’(2’), 5’-bisphosphate nucleotidase Multiple - 2 2
  RAB GDP dissociation inhibitor alpha Multiple - 2 3
  Laminin Multiple - 2 2
  1. a) The number of proteins in each protein group.
  2. b) The number of expressed sequence tags that were matched to proteins in this protein group.
  3. c) ’Multiple’ indicates that different (helminth) genera have identified proteins in that protein group.
  4. For simplicity, all protein groups are represented by one protein.
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BMC Research Notes

ISSN: 1756-0500

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