Table 3 Alignment data summary
From: Empirical assessment of sequencing errors for high throughput pyrosequencing data
Data id | MH | SA | SP | |||
|---|---|---|---|---|---|---|
Assembler | Newbler | Celera | Newbler | Celera | Newbler | Celera |
Nb. of candidate alignments | 84,376 | 77,058 | 269,693 | 209,626 | 172,436 | 119,367 |
Cand. alignments avg. length | 242 | 299 | 257 | 266 | 242 | 259 |
Nb. of bona fide alignments | 79,135 | 73,535 | 108,718 | 84,692 | 144,336 | 101,157 |
Bona fide alignments avg. length | 245 | 300 | 258 | 266 | 245 | 259 |