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Table 2 Summary statistics for the loci developed in this study

From: Twenty-one new sequence markers for population genetics, species delimitation and phylogenetics in wall lizards (Podarcis spp.)

Locus Species sequenced Success rate (%) N Sites (bp) NetSites S H Hd π Rm Indels (size) GenBank accession numbers
Pod6b PB, PL, PV, PM 76 74 481-491 404 55 33 0.945 0.012 4 6 (7/1/1/5/8/2) KC680863 – KC680907
Pod7b PB, PL, PV, PM, PT 88 86 379-418 312 42 26 0.918 0.018 2 5 (1/7/20/19/6) KC680908 – KC680951
Pod11 PB, PL, PV, PM, PT 86 84 432-437 344 43 34 0.944 0.016 7 5 (1/M/5/1/1) KC680952 – KC681005
Pod12b PB, PL, PV, PT 69 68 404-656 288 65 32 0.933 0.025 4 9 (6/7/1/1/1/245/3/3/1) KC681006 – KC681046
Pod13 PB, PL, PV, PM 71 70 367-381 261 33 20 0.713 0.011 3 4 (14/4/1/1) KC681047 – KC681087
Pod14 PB, PL, PV, PM 82 80 459-486 363 33 27 0.918 0.016 4 6 (10/22/21/1/3/9) KC681088 – KC681136
Pod14b PB, PL, PV, PM, PT 84 82 486-508 348 54 31 0.893 0.016 5 7 (3/M/4/M/28/1/4) KC681137 – KC681183
Pod15 PB, PL, PV, PM, PT 82 80 498-540 370 51 35 0.955 0.021 5 5 (11/2/2/2/1) KC681184 – KC681227
Pod15b PB, PL, PV, PM, PT 86 84 420-433 399 41 35 0.939 0.009 5 5 (M/13/2/2/M) KC681228 – KC681284
Pod16 PB, PL, PV, PM, PT 76 74 313-364 213 46 38 0.972 0.035 6 11 (18/M/1/5/18/11/7/13/2/11/33) KC681285 -- KC681332
Pod17 PB, PL, PV, PM, PT 88 86 380-405 246 32 29 0.927 0.014 2 7 (14/1/1/25/M/1/1) KC681333 - KC681399
Pod20 PB, PL, PV, PM, PT 82 80 396-410 305 34 27 0.913 0.012 1 4 (1/1/M/13) KC681400 - KC681448
Pod21 PB, PL, PV, PM, PT 86 84 303-316 212 39 24 0.916 0.017 2 4 (9/7/1/13) KC681449 - KC681492
Pod25 PB, PL, PV, PM, PT 53 52 266-294 233 29 21 0.937 0.020 2 4 (1/18/8/2) KC681493 - KC681522
Pod31 PB, PL, PV, PM, PT 69 68 491-909 383 37 28 0.904 0.010 4 13 (1/5/17/1/9/382/10/2/5/10/2/12/2) KC681523 - KC681565
Pod33 PB, PL, PV, PM, PT 86 84 325-340 242 29 30 0.840 0.010 3 4 (1/16/3/M) KC681566 - KC681614
Pod38 PB, PL, PV, PM 80 78 536-539 406 39 15 0.860 0.024 3 5 (1/2/1/2/1) KC681615 - KC681656
Pod43 PB, PL, PV, PM, PT 73 72 394 366 16 17 0.720 0.004 0 0 KC681657 - KC681692
Pod55 PB, PL, PV, PM, PT 90 88 423 354 33 26 0.737 0.009 5 0 KC681693 - KC681736
Pod69 PB, PL, PV, PM, PT 90 88 388 339 15 15 0.812 0.004 0 0 KC681737 - KC681780
Pod72 PB, PL, PV, PM, PT 61 60 469-485 358 52 20 0.884 0.023 8 6 (1/5/11/1/7/14) KC681781 - KC681810
  1. Species sequenced: PB Podarcis bocagei, PL P. liolepis, PV P. vaucheri, PM P. muralis, PT P. tiliguerta. N number of sequenced gene copies, Sites size range of sequences in the alignment, NetSites number of sites effectively used for polymorphism calculations (removing indels and Ns), S number of segregating sites; π nucleotide diversity, H number of haplotypes, Hd haplotype diversity, Rm minimum number of recombination events [15], Indels number of insertion/deletion polymorphisms. The size of indels (with respect to each alignment) is reported in parentheses. M means microsatellite-type indel. For the same information detailed by species, please see Additional file 2.