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Table 1 BLAST analysis of the reference gene sequences

From: Selection and validation of reference genes for quantitative gene expression studies by real-time PCR in eggplant (Solanum melongena L)

Gene name

 

Accession

Query coverage

E value

Max ident

18S rRNA

Solanum melongena

JX448341

100%

0.0

100%

Solanum tuberosum

X67238

100%

0.0

100%

Solanum lycopersicum

AC246968

100%

0.0

98%

Solanum lycopersicum

X51576

100%

0.0

98%

Nicotiana tabacum

HQ384692

100%

0.0

97%

APRT

Solanum melongena

JX448345

100%

0.0

100%

Solanum tuberosum

DQ284483

100%

0.0

94%

Solanum lycopersicum

AK321573

95%

1e-176

92%

GAPDH

Solanum melongena

JX448342

100%

0.0

100%

Solanum tuberosum

AF527779

100%

0.0

97%

Solanum lycopersicum

U97257

100%

0.0

96%

Nicotiana langsdorffii

EF636821

99%

0.0

95%

Cyclophilin

Solanum melongena

JX448344

100%

2e-137

100%

Solanum tuberosum

DQ235183

100%

2e-107

93%

Solanum sogarandinum

EF043281

100%

4e-104

92%

Nicotiana tabacum

AY368274

100%

4e-104

93%

Actin

Solanum melongena

JX524155

100%

4e-175

100%

Solanum tuberosum

X55749

100%

4e-175

100%

Solanum lycopersicum

BT012695

99%

9e-122

91%

Nicotiana tabacum

AF154640

99%

2e-114

89%

RuBP

Solanum melongena

JX448343

100%

1e-139

100%

Solanum lycopersicum

AK319576

95%

7e-102

93%

Capsicum annuum

AF065615

95%

9e-96

91%

Solanum tuberosum

JX576219

95%

7e-92

90%