Skip to main content

Table 1 Genetic polymorphism of hangul population at Dachigam National Park, Kashmir over six microsatellite loci

From: Loss of genetic diversity and inbreeding in Kashmir red deer (Cervus elaphus hanglu) of Dachigam National Park, Jammu & Kashmir, India

Loci

Sample size

Allele range

N A 1

N E 2

H O 3

H E 4

PIC5

F IS 6 (W&C)

P ID 7 (locus)

P ID 8 (cum)

PIDsibs9(locus)

PIDsibs10(cum)

ϵ 1 11

ϵ 1 12

F NULL 13

Ca-30

25

281-309

6

2.53

0.08

0.62

0.53

0.87

2.3E-01

2.3E-01

5.1E-01

5.1E-01

0.65

0.00

0.77

Ca-38†

27

163-183

7

1.68

0.44

0.41

0.38

−0.08

3.8E-01

8.8E-02

6.4E-01

3.2E-01

0.00

0.04

−0.05

Ca-42

30

104-138

11

4.68

0.83

0.80

0.76

−0.04

7.3E-02

6.4E-03

3.8E-01

1.2E-01

0.07

0.03

−0.04

Ca-43

25

225-253

11

3.78

0.44

0.75

0.72

0.42

8.7E-02

5.5E-04

4.0E-01

4.9E-02

0.11

0.00

0.26

Ca-13

24

205-233

9

6.26

0.42

0.86

0.82

0.51

4.4E-02

2.4E-05

3.4E-01

1.7E-02

0.00

0.00

0.33

Ca-18

20

126-138

5

2.09

0.20

0.53

0.47

0.63

2.8E-01

6.8E-06

5.6E-01

9.4E-03

0.14

0.08

0.43

Mean

  

8.17

3.5

0.40

0.66

0.61

0.38

       

± SE

  

1.05

0.71

0.11

0.07

0.07

0.15

       
  1. N 1 A – observed number of alleles; N E 2 – effective number of alleles; H O 3 – observed heterozygosity; H E 4 – expected heterozygosity; PIC5- polymorphic information content; F IS 6 – inbreeding coefficient index; P ID 7 – (locus)- probability of identity (locus); P ID 8 – (cum)- probability of identity (cumulative); PID sibs9 (locus) - probability of identity for sibs (locus); PID sibs10 (cum)- probability of identity for sibs (cumulative); ϵ 1 11 – allelic dropout rate; ϵ 2 12 – false allele rate; F NULL 13 – predicted frequencies of null alleles.
  2. † indicates no deviation from HWE (P > 0.05).