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Table 1 Genetic polymorphism of hangul population at Dachigam National Park, Kashmir over six microsatellite loci

From: Loss of genetic diversity and inbreeding in Kashmir red deer (Cervus elaphus hanglu) of Dachigam National Park, Jammu & Kashmir, India

Loci Sample size Allele range N A 1 N E 2 H O 3 H E 4 PIC5 F IS 6 (W&C) P ID 7 (locus) P ID 8 (cum) PIDsibs9(locus) PIDsibs10(cum) ϵ 1 11 ϵ 1 12 F NULL 13
Ca-30 25 281-309 6 2.53 0.08 0.62 0.53 0.87 2.3E-01 2.3E-01 5.1E-01 5.1E-01 0.65 0.00 0.77
Ca-38 27 163-183 7 1.68 0.44 0.41 0.38 −0.08 3.8E-01 8.8E-02 6.4E-01 3.2E-01 0.00 0.04 −0.05
Ca-42 30 104-138 11 4.68 0.83 0.80 0.76 −0.04 7.3E-02 6.4E-03 3.8E-01 1.2E-01 0.07 0.03 −0.04
Ca-43 25 225-253 11 3.78 0.44 0.75 0.72 0.42 8.7E-02 5.5E-04 4.0E-01 4.9E-02 0.11 0.00 0.26
Ca-13 24 205-233 9 6.26 0.42 0.86 0.82 0.51 4.4E-02 2.4E-05 3.4E-01 1.7E-02 0.00 0.00 0.33
Ca-18 20 126-138 5 2.09 0.20 0.53 0.47 0.63 2.8E-01 6.8E-06 5.6E-01 9.4E-03 0.14 0.08 0.43
Mean    8.17 3.5 0.40 0.66 0.61 0.38        
± SE    1.05 0.71 0.11 0.07 0.07 0.15        
  1. N 1 A observed number of alleles; N E 2 effective number of alleles; H O 3 observed heterozygosity; H E 4 expected heterozygosity; PIC5- polymorphic information content; F IS 6 inbreeding coefficient index; P ID 7 (locus)- probability of identity (locus); P ID 8 (cum)- probability of identity (cumulative); PID sibs9 (locus) - probability of identity for sibs (locus); PID sibs10 (cum)- probability of identity for sibs (cumulative); ϵ 1 11 allelic dropout rate; ϵ 2 12 false allele rate; F NULL 13 predicted frequencies of null alleles.
  2. † indicates no deviation from HWE (P > 0.05).