Marker | Localization | Coding region | Length (bp) | Primer name | Primer sequence (5′-3′) | Ta (°C) | References |
---|---|---|---|---|---|---|---|
rps16 | Chloroplast | Intron | 956 | rps_F | GTGGTAGAAAGCAACGTGCGACTT | 56 | [31] |
rps_R | TGCGGATTCCTAAGAGCAGCGT | [31] | |||||
rp132-tmL | Chloroplast | Intergenic spacer | 1377 | trnLUAGR | CTGCTTCCTAAGAGCAGCGT | 50 | [32] |
rpl32_F | CAGTTCCAAAAAAACGTACTTC | [32] | |||||
trnH-psbA | Chloroplast | Intergenic spacer | 460 | psbA3′f | GTTATGCATGAACGTAATGCTC | 56 | [33] |
trnHf | CGCATGGTGGATTCACAATCC | [34] | |||||
trnT-tmL | Chloroplast | Intergenic spacer | 1016 | trnTUGU2F | CAAATGCGATGCTCTAACCT | 56 | [35] |
5′tmLUAAR | TCTACCGATTTCGCCATATC | [36] | |||||
atpB-rbcL | Chloroplast | Intergenic spacer | 927 | atpB-rbcL_F | AACACCAGCTTTRAATCCAA | 56 | [37] |
atpB-rbcL_R | ACATCKARKTACKGGACCAATAA | [37] | |||||
trnL-trnF | Chloroplast | Intergenic spacer | 406 | trnL_UNIE | GGTTCAAGTCCCTCTATCCC | 50 | [36] |
trnL_UNIF | ATTTGAACTGGTGACACGAG | [36] | |||||
GAI | Chromosome 1 | Transcription factor for GA | 761 | GAI_F | ATGGATGAGCTTCTGCTGT | 50 | [27] |
GAI_R | TAGAAGTGCATCCTGRAGAAT | [27] | |||||
ID04 | Chromosome 3 | ZIP DNA-binding protein | 419 | Id04_F | CACCAGTCCCTTACCAGTCT | 55 | [38] |
Id04_R | CAGTAGAGGAACACAACTGAG | [38] | |||||
IIC08 | Chromosome 3 | ZINC finger protein | 418 | IIC08_F | CAAGGCCTTCTCTTCGTACC | 60 | [38] |
IIC08_R | AAGAATTCATATCGCCGACC | [38] | |||||
ATP | Chromosome 7 | ATP synthase | 800 | ATP_F | ATGCTGTTCCAGTCCGTTTC | 60 | - |
ATP_R | GGGTCGATGGTGATCTTCT | - | |||||
UFGT | Chromosome 16 | Glucosyltransferase | 919 | UFGT_F4 | ATGTCTCAAACCACCACCAACC | 63 | - |
UFGT_R3 | TGACGGTGCCAAAGCTAATG | - |