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Table 2 Percentage of initial reads mapped back to the de novo transcriptome

From: Impact of RNA-seq attributes on false positive rates in differential expression analysis of de novo assembled transcriptomes

  

100PE

50PE

100SE

50SE

Salix purpurea

PE assembly

83%

81%

90%

89%

SE assembly

83%

81%

91%

90%

Rhytidophyllum vernicosum

PE assembly

88%

88%

95%

95%

SE assembly

89%

88%

95%

95%

  1. PE assembly and SE assembly relate to the transcriptomes assembled with paired-end or single-end reads respectively.