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Table 2 Percentage of initial reads mapped back to the de novo transcriptome

From: Impact of RNA-seq attributes on false positive rates in differential expression analysis of de novo assembled transcriptomes

   100PE 50PE 100SE 50SE
Salix purpurea PE assembly 83% 81% 90% 89%
SE assembly 83% 81% 91% 90%
Rhytidophyllum vernicosum PE assembly 88% 88% 95% 95%
SE assembly 89% 88% 95% 95%
  1. PE assembly and SE assembly relate to the transcriptomes assembled with paired-end or single-end reads respectively.