From: False positives complicate ancient pathogen identifications using high-throughput shotgun sequencing
Platform | Sample Description | Reads Mapped (% Mapped) | Molecular Length (bp) | Total Mapped (bp) |
---|---|---|---|---|
HeliScope | Grand Plaza Bulk 1 | 3,880 (0.01%) | 28.8 ± 5.6 | 111,646 |
Grand Plaza Bulk 2 | 3,451 (0.01%) | 30.0 ± 5.7 | 99,916 | |
Grand Plaza Phos. 1 | 2,626 (0.01%) | 28.5 ± 5.4 | 74,846 | |
Grand Plaza Phos. 2 | 2,198 (0.01%) | 28.9 ± 5.8 | 63,479 | |
Churchyard Bulk 1 | 3,794 (0.01%) | 28.8 ± 5.8 | 109,284 | |
Churchyard Bulk 2 | 3,672 (0.01%) | 28.9 ± 5.9 | 106,060 | |
Churchyard Phos. 1 | 2,595 (0.01%) | 28.1 ± 5.4 | 72,809 | |
Churchyard Phos. 2 | 3,723 (0.01%) | 28.5 ± 5.7 | 106,284 | |
Grand Plaza Sheared | 0 (0.00%) | — | 0 | |
Churchyard Sheared | 2 (0.04%) | 24.0 ± 0.0 | 48 | |
Soil Bulk | 63 (0.01%) | 26.3 ± 3.7 | 1,656 | |
Soil Sheared | 3 (0.00%) | 25.3 ± 1.2 | 76 | |
HiSeq 2500 | TP04 | 0 (0.00%) | — | 0 |
TP09 | 0 (0.00%) | — | 0 | |
TP10 | 0 (0.00%) | — | 0 | |
TP18 | 0 (0.00%) | — | 0 | |
TP37 | 0 (0.00%) | — | 0 | |
TP48 | 0 (0.00%) | — | 0 | |
Soil Bulk | 0 (0.00%) | — | 0 |