Table 1 Summary of SNPs used for the catfish 250K SNP array design
From: Development of the catfish 250K SNP array for genome-wide association studies
SNP sources | SNPs selected for array | SNPs passed Affymetrix evaluation | SNPs included on the array |
|---|---|---|---|
Gene-associated SNPs | Â | Â | Â |
 Channel catfish | 93,699 | 72,202 | 32,188 (12.9%) |
 Blue catfish | 59,464 | 48,900 | 31,392 (12.6%) |
 Inter-specific | 83,549 | 72,260 | 39,605 (15.8%) |
Anonymous SNPs | Â | Â | Â |
 Channel catfish | 404,777 | 302,309 | 146,928 (58.7%) |
Total SNPs | 641,489 | 495,671 | 250,113 (100%) |