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Table 4 Transferability of SNPs to other catfish species

From: Development of the catfish 250K SNP array for genome-wide association studies

Species

Latin name

Converted SNPs*

Polymorphic SNPs*

Converted SNPs**

Polymorphic SNPs**

Blue catfish (Rio Grande)

Ictalurus furcatus

190,867 (76.3%)

19,549 (7.8%)

25,722 (81.9%)

13,667 (43.5%)

Blue catfish (D&B)

I. furcatus

193,039 (77.2%)

9,684 (3.9%)

25,109 (80.0%)

5,859 (18.7%)

Brown bullhead catfish

Ameiurus nebulosus

126,076 (50.4%)

12,649 (5.1%)

17,739 (56.5%)

1,376 (4.4%)

White catfish

A. catus

129,716 (51.9%)

12,833 (5.1%)

18,286 (58.3%)

1,452 (4.6%)

  1. *All 250,113 SNPs on the array, **SNPs from blue catfish (31,392).