Source | Detection of toxic genes | SCCmec | MLST |
|---|
| |
tst
|
eta
|
etb
|
sea
|
seb
|
sec
|
sed
|
see
|
seg
|
seh
|
sei
|
sej
|
pvl
| mec type | ccr type | SCC mec |
arcC
|
aroE
|
glpF
|
gmk
|
pta
|
tpi
|
yqil
| ST |
CC
|
|---|
A. blood | - | - | - | - | - | - | - | - | + | - | + | - | - | A | 2 | II | 1 | 136 | 1 | 4 | 12 | 1 | 10 | 764 | 5 |
Sputum | - | - | - | - | - | - | - | - | + | - | + | - | - | A | 2 | II | 1 | 136 | 1 | 4 | 12 | 1 | 10 | 764 | 5 |
Joint fluid | - | - | - | - | - | - | - | - | + | - | + | - | - | A | 2 | II | 1 | 136 | 1 | 4 | 12 | 1 | 10 | 764 | 5 |
- A: acetyltransferase, arc: carbamate kinase, aro: shikimate dehydrogenase, CC: clonal complex, ccr: cassette chromosome recombinase, eta: exfoliatin toxin a etb: exfoliatin toxin b, glp: glycerol kinase, gmk: guanylate kinase, MLST: multilocus sequence typing, pta: phosphate acetyltransferase, pvl: Panton-Valentine leukocidine, sea: staphylococcal enterotoxin a, seb: staphylococcal enterotoxin b, sec: staphylococcal enterotoxin c, sed: staphylococcal enterotoxin d, seg: staphylococcal enterotoxin g, seh: staphylococcal enterotoxin h, sei: staphylococcal enterotoxin I, sej: staphylococcal enterotoxin j, SCCmec: Staphylococcal casstte chromosmome mec, ST: sequence type, tpi: triosephosphate isomerase, yqi: acetyle coenzyme.
