Table 3 Summary of BLAST comparisons
Taxa | Â | Entries | BLAST algorithm | Poecilia formosa | Poecilia mexicana |
|---|---|---|---|---|---|
Gasterosteus aculeatus | cDNA | 16,728 | tblastx | 45,098 (35.79%) | 24,653 (31.51%) |
Danio rerio | cDNA | 28,037 | tblastx | 72,993 (57.94%) | 39,005 (49.86%) |
Protein | 27,014 | blastx | 72,045 (57.18%) | 38,368 (49.05%) | |
Oryzias latipes | cDNA | 22,456 | tblastx | 78,151 (62.03%) | 42,575 (54.43%) |
Protein | 22,078 | blastx | 76,539 (60.75%) | 41,422 (52.95%) | |
Oreochromis niloticus | cDNA | 23,339 | tblastx | 78,231 (62.09%) | 42,999 (54.97%) |
Protein | 23,162 | blastx | 76,301 (60.56%) | 41,744 (53.34%) | |
Swiss-Prot | Protein | 534,695 | blastx | 90,288 (71.66%) | 51,821 (66.25%) |