Table 1 Primers for amplification and sequencing
SNP ID | Â | Â | sequence (5 'to 3') |
|---|---|---|---|
IL-10-819 (rs1800871) | External | forward | TCAACTTCTTCCACCCCATC |
| Â | Â | reverse | GGCACATGTTTCCACCTCTT |
| Â | Internal | forward | GGGTGAGGAAACCAAATTCTC |
| Â | Â | reverse | TGCACTTGCTGAAAGCTTCTT |
IL-10-592 (rs1800872) | External | forward | TGGAAACATGTGCCTGAGAA |
| Â | Â | reverse | CAGTGACGTGGACAAATTGC |
| Â | Internal | forward | AAAGGAGCCTGGAACACATC |
| Â | Â | reverse | CCTTAGGTCTCTGGGCCTTA |
HLA-DPA1 (rs3077) | External | forward | CTGAACTCCAGCTGCCCTAC |
| Â | Â | reverse | CTCCCCGCTCTGAAATACTG |
| Â | Internal | forward | AACTCCAGCTGCCCTACAAA |
| Â | Â | reverse | GGATAAAAGGCTCAATGAAAGG |
HLA-DPB1 (rs9277535) | External | forward | GGGCCTGTTACACATGACACT |
| Â | Â | reverse | TGGATGCATTCAAAAGTCCA |
| Â | Internal | forward | TGCCCCCAAATCAAGTTTAG |
| Â | Â | reverse | TGGCACACAAAGAAAATGGT |
HLA-DQB2 (rs7453920) | External | forward | ACGCGAAATTGAGTTCTTGG |
| Â | Â | reverse | CAGGCATGGGTTTACTTGGT |
| Â | Internal | forward | GGTAAGAGGGAAAGCCCAGT |
| Â | Â | reverse | CTGTCTCCGAGATTCCCAAG |
HLA-DQB1 (rs2856718) | External | forward | TTGGCCAGAGTATGCTTTCA |
| Â | Â | reverse | TTTGCCCTGAGGTCTATGCT |
| Â | Internal | forward | TATGCTTTCACCAACTTCCTTCAC |
| Â | Â | reverse | GAGCTCCCTCTGGCAGGTT |
IL-28B (rs8099917) | External | forward | GTGCATATGTTTTCTGAC |
| Â | Â | reverse | GAGGCCCCTCACCCATGC |
| Â | Internal | forward | AAGTAACACTTGTTCCTTGTAAAAGATTCC |
| Â | Â | reverse | CGCTATAATTAAAGATGTGGGAGAATGCAA |