Table 1 Blast parameters setting
From: Next generation sequencing reads comparison with an alignment-free distance
Parameter | Value | Description |
|---|---|---|
-p | blastn | Blast program for nucleotide sequences |
-F | F | Masking and filtering off |
-w | 4 | Windows size |
-i | r1.fas | First input filename |
-j | r2.fas | Second input filename |
-m | 8 | Alignment view set to tabular output |