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Table 2 Predicted ligand binding site in residues

From: Prediction of CTL epitope, in silico modeling and functional analysis of cytolethal distending toxin (CDT) protein of Campylobacter jejuni

Site no

Residues

    

Header binding site 1

ILE_9^118^

LEU_9^126^

TRP_9^154^

ILE_9^166^

LEU_9^175^

ILE_9^208^

LEU_9^116^

TRP_9^196^

LEU_9^198^

LEU_9^158^

ALA_9^164^

MET_9^165^

LYS_9^197^

VAL_9^206^

LEU_9^251^

ILE_9^217^

LEU_9^156^

THR_9^252^

ASN_9^210^

LYS_9^215^

ILE_9^234^

CYS_9^216^

ASN_9^213^

LYS_9^209^

ILE_9^182^

PHE_9^163^

ASP_9^162^

ASN_9^161^

TYR_9^159^

PRO_9^160^

Header binding site 2

LEU_9^116^

THR_9^117^

THR_9^252^

THR_9^253^

PRO_9^254^

PRO_9^255^

ALA_9^125^

LEU_9^142^

ARG_9^152^

LEU_9^119^

GLY_9^123^

PHE_9^256^

LYS_9^146^

THR_9^257^

 

Header binding site 3

TRP_9^136^

TRP_9^138^

VAL_9^231^

PHE_9^232^

ASN_9^180^

GLY_9^181^

LYS_9^233^

GLY_9^179^

ILE_9^182^

ILE_9^137^