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Table 2 Putative ATP-binding cassette (ABC) transporter genes identified as up-regulated DEGs in K. caspica

From: Comparative transcriptome analysis of the Asteraceae halophyte Karelinia caspica under salt stress

Unigene ID

Length (bp)

Subfamily

Best hit

E-value

Blast annotation/Organism

comp465528

297

A

Q99758

1E-63

ATP-binding cassette sub-family A member 3 [Homo sapiens]

comp16398

388

B

Q8LPT1

3E-54

ABC transporter B family member 6 [Arabidopsis thaliana]

comp17267

328

B

Q9ZR72

1E-59

ABC transporter B family member 1 [Arabidopsis thaliana]

comp450357

451

B

Q704E8

2E-61

ATP-binding cassette sub-family B member 7 [Rattus norvegicus]

comp454701

282

B

Q8LPK2

7E-15

ABC transporter B family member 2 [Arabidopsis thaliana]

comp577194

451

B

Q9NRK6

3E-17

ATP-binding cassette sub-family B member 10 [Homo sapiens]

comp20933

300

C

Q9LZJ5

9E-47

ABC transporter C family member 14 [Arabidopsis thaliana]

comp267971

705

D

P48410

9E-125

ATP-binding cassette sub-family D member 2-like [Acyrthosiphon pisum]

comp324163

542

D

P48410

4E-40

ATP-binding cassette sub-family D member 1 [Mus musculus]

comp352820

476

D

Q9QY44

9E-45

ATP-binding cassette sub-family D member 2 [Rattus norvegicus]

comp5337

228

D

Q9UBJ2

3E-20

ATP-binding cassette sub-family D member 2 [Homo sapiens]

comp481971

244

E

P61222

5E-30

ATP-binding cassette sub-family E member 1 [Mus musculus]

comp29933

2612

F

Q9UG63

0.0

ATP-binding cassette sub-family F ember 2 [Tribolium castaneum]

comp516400

351

F

Q8K268

2E-33

ATP-binding cassette sub-family F member 2 [Homo sapiens]

comp306780

297

G

Q9H172

1E-46

ATP-binding cassette sub-family G member 4 [Homo sapiens]