Table 9 Selected results for TFs with differences in tissue specificity
From: A property-based analysis of human transcription factors
Category* | Term | Observed | Expected | Pvalue | Benjamini | MCC |
|---|---|---|---|---|---|---|
General | DNA_Binding | 126 | 85 | 1.36E-10 | 1.09E-09 | 0.166 |
Specific | DNA_Binding | 306 | 205 | 1.92E-10 | 1.53E-09 | 0.280 |
Sumoylation | 57 | 31 | 1.85E-06 | 7.39E-06 | 0.115 | |
PF00104(Hormone_recep) | 28 | 7 | 2.32E-11 | 1.69E-08 | 0.179 | |
PF01352(KRAB) | 16 | 40 | 9.20E-07 | 1.67E-04 | −0.103 | |
Unknown | DNA_Binding | 702 | 486 | 2.82E-10 | 2.26E-09 | 0.459 |
Ubiquitination | 229 | 355 | 3.19E-10 | 1.28E-09 | −0.263 | |
Methylation | 105 | 149 | 1.68E-07 | 4.47E-07 | −0.116 | |
PPI | 146 | 172 | 1.48E-03 | 2.37E-03 | −0.091 | |
PF01352(KRAB) | 200 | 96 | 2.11E-10 | 7.66E-08 | 0.324 |