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Table 4 Summary of all pathways with over-represented gene lists from KEGG (p < 0.05)

From: Transcriptional profiling of PRKG2-null growth plate identifies putative down-stream targets of PRKG2

KEGG pathway

# genes

% total

P-value

Benjamini *

Axon guidance

29

1.8

0.0014

0.25

Calcium signaling pathway

31

1.9

0.0220

0.89

Glycan structures - biosynthesis 2

14

0.9

0.0250

0.81

Adherens junction

16

1

0.0260

0.73

Long-term depression

16

1

0.0290

0.69

Wnt signaling pathway

26

1.6

0.0520

0.84

  1. *Benjamini is a measure of family-wise false discovery rate as described by Huang da et al. [13].
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BMC Research Notes

ISSN: 1756-0500

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