From: PR2ALIGN: a stand-alone software program and a web-server for protein sequence alignment using weighted biochemical properties of amino acids
Pair-wise sequence identity
Gap initiation penalty
Gap extension penalty
N pairs
0-10%
−17
−1
1,282
10-20%
2,023
20-30%
−16
1,674
30-40%
1,100
Above 40%
−15
705