TY - BOOK AU - Dieckmann, U. AU - Law, R. AU - Metz, J. A. PY - 2000 DA - 2000// TI - The geometry of ecological interactions: simplifying spatial complexity PB - Cambridge University Press CY - Cambridge UR - https://doi.org/10.1017/CBO9780511525537 DO - 10.1017/CBO9780511525537 ID - Dieckmann2000 ER - TY - JOUR AU - Durrett, R. AU - Levin, S. PY - 1994 DA - 1994// TI - The importance of being discrete (and spatial) JO - Theor Popul Biol VL - 46 UR - https://doi.org/10.1006/tpbi.1994.1032 DO - 10.1006/tpbi.1994.1032 ID - Durrett1994 ER - TY - JOUR AU - Griffin, A. AU - West, S. AU - Buckling, A. PY - 2004 DA - 2004// TI - Cooperation and competition in pathogenic bacteria JO - Nature VL - 430 UR - https://doi.org/10.1038/nature02744 DO - 10.1038/nature02744 ID - Griffin2004 ER - TY - JOUR AU - Nahum, J. R. AU - Harding, B. N. AU - Kerr, B. PY - 2011 DA - 2011// TI - Evolution of restraint in a structured rock-paper-scissors community JO - Proc Natl Acad Sci USA VL - 108 UR - https://doi.org/10.1073/pnas.1100296108 DO - 10.1073/pnas.1100296108 ID - Nahum2011 ER - TY - JOUR AU - Datta, M. S. AU - Korolev, K. S. AU - Cvijovic, I. AU - Dudley, C. AU - Gore, J. PY - 2013 DA - 2013// TI - Range expansion promotes cooperation in an experimental microbial metapopulation JO - Proc Natl Acad Sci VL - 110 UR - https://doi.org/10.1073/pnas.1217517110 DO - 10.1073/pnas.1217517110 ID - Datta2013 ER - TY - JOUR AU - Hallatschek, O. AU - Hersen, P. AU - Ramanathan, S. AU - Nelson, D. R. PY - 2007 DA - 2007// TI - Genetic drift at expanding frontiers promotes gene segregation JO - Proc Natl Acad Sci VL - 104 UR - https://doi.org/10.1073/pnas.0710150104 DO - 10.1073/pnas.0710150104 ID - Hallatschek2007 ER - TY - JOUR AU - Dyken, J. D. AU - Müller, M. J. AU - Mack, K. M. AU - Desai, M. M. PY - 2013 DA - 2013// TI - Spatial population expansion promotes the evolution of cooperation in an experimental prisoner’s dilemma JO - Curr Biol VL - 23 ID - Dyken2013 ER - TY - JOUR AU - Müller, M. J. AU - Neugeboren, B. I. AU - Nelson, D. R. AU - Murray, A. W. PY - 2014 DA - 2014// TI - Genetic drift opposes mutualism during spatial population expansion JO - Proc Natl Acad Sci VL - 111 UR - https://doi.org/10.1073/pnas.1313285111 DO - 10.1073/pnas.1313285111 ID - Müller2014 ER - TY - JOUR AU - Korolev, K. S. AU - Xavier, J. B. AU - Nelson, D. R. AU - Foster, K. R. PY - 2011 DA - 2011// TI - A quantitative test of population genetics using spatiogenetic patterns in bacterial colonies JO - Am Nat VL - 178 UR - https://doi.org/10.1086/661897 DO - 10.1086/661897 ID - Korolev2011 ER - TY - JOUR AU - Rudge, T. J. AU - Federici, F. AU - Steiner, P. J. AU - Kan, A. AU - Haseloff, J. PY - 2013 DA - 2013// TI - Cell polarity-driven instability generates self-organized, fractal patterning of cell layers JO - ACS Synth Biol VL - 2 UR - https://doi.org/10.1021/sb400030p DO - 10.1021/sb400030p ID - Rudge2013 ER - TY - JOUR AU - Keymer, J. AU - Galajda, P. AU - Muldoon, C. AU - Park, S. AU - Austin, R. PY - 2006 DA - 2006// TI - Bacterial metapopulations in nanofabricated landscapes JO - Proc Natl Acad Sci USA VL - 103 UR - https://doi.org/10.1073/pnas.0607971103 DO - 10.1073/pnas.0607971103 ID - Keymer2006 ER - TY - JOUR AU - Hol, F. J. AU - Galajda, P. AU - Nagy, K. AU - Woolthuis, R. G. AU - Dekker, C. AU - Keymer, J. E. PY - 2013 DA - 2013// TI - Spatial structure facilitates cooperation in a social dilemma: Empirical evidence from a bacterial community JO - PloS One VL - 8 UR - https://doi.org/10.1371/journal.pone.0077042 DO - 10.1371/journal.pone.0077042 ID - Hol2013 ER - TY - JOUR AU - Connell, J. L. AU - Ritschdorff, E. T. AU - Whiteley, M. AU - Shear, J. B. PY - 2013 DA - 2013// TI - 3D printing of microscopic bacterial communities JO - Proc Natl Acad Sci USA VL - 110 UR - https://doi.org/10.1073/pnas.1309729110 DO - 10.1073/pnas.1309729110 ID - Connell2013 ER - TY - JOUR AU - Drescher, K. AU - Nadell, C. D. AU - Stone, H. A. AU - Wingreen, N. S. AU - Bassler, B. L. PY - 2014 DA - 2014// TI - Solutions to the public goods dilemma in bacterial biofilms JO - Curr Biol VL - 24 UR - https://doi.org/10.1016/j.cub.2013.10.030 DO - 10.1016/j.cub.2013.10.030 ID - Drescher2014 ER - TY - JOUR AU - Vliet, S. AU - Hol, F. J. H. AU - Weenink, T. AU - Galajda, P. AU - Keymer, J. E. PY - 2014 DA - 2014// TI - The effects of chemical interactions and culture history on the colonization of structured habitats by competing bacterial populations JO - BMC Microbiol VL - 14 UR - https://doi.org/10.1186/1471-2180-14-116 DO - 10.1186/1471-2180-14-116 ID - Vliet2014 ER - TY - JOUR AU - Hol, F. J. AU - Voges, M. J. AU - Dekker, C. AU - Keymer, J. E. PY - 2014 DA - 2014// TI - Nutrient-responsive regulation determines biodiversity in a colicin-mediated bacterial community JO - BMC Biol VL - 12 UR - https://doi.org/10.1186/s12915-014-0068-2 DO - 10.1186/s12915-014-0068-2 ID - Hol2014 ER - TY - JOUR AU - Weber, M. F. AU - Poxleitner, G. AU - Hebisch, E. AU - Frey, E. AU - Opitz, M. PY - 2014 DA - 2014// TI - Chemical warfare and survival strategies in bacterial range expansions JO - J R Soc Interface VL - 11 UR - https://doi.org/10.1098/rsif.2014.0172 DO - 10.1098/rsif.2014.0172 ID - Weber2014 ER - TY - JOUR AU - Hol, F. J. H. AU - Dekker, C. PY - 2014 DA - 2014// TI - Zooming in to see the bigger picture: microfluidic and nanofabrication tools to study bacteria JO - Science VL - 346 UR - https://doi.org/10.1126/science.1251821 DO - 10.1126/science.1251821 ID - Hol2014 ER - TY - JOUR AU - Nowak, M. AU - May, R. PY - 1992 DA - 1992// TI - Evolutionary games and spatial chaos JO - Nature VL - 359 UR - https://doi.org/10.1038/359826a0 DO - 10.1038/359826a0 ID - Nowak1992 ER - TY - JOUR AU - Lion, S. AU - Baalen, M. PY - 2008 DA - 2008// TI - Self-structuring in spatial evolutionary ecology JO - Ecol Lett VL - 11 UR - https://doi.org/10.1111/j.1461-0248.2007.01132.x DO - 10.1111/j.1461-0248.2007.01132.x ID - Lion2008 ER - TY - JOUR AU - Kreft, J. -. U. PY - 2004 DA - 2004// TI - Biofilms promote altruism JO - Microbiology VL - 150 UR - https://doi.org/10.1099/mic.0.26829-0 DO - 10.1099/mic.0.26829-0 ID - Kreft2004 ER - TY - JOUR AU - Santos, F. AU - Pacheco, J. AU - Lenaerts, T. PY - 2006 DA - 2006// TI - Evolutionary dynamics of social dilemmas in structured heterogeneous populations JO - Proc Natl Acad Sci USA VL - 103 UR - https://doi.org/10.1073/pnas.0508201103 DO - 10.1073/pnas.0508201103 ID - Santos2006 ER - TY - JOUR AU - Doebeli, M. AU - Hauert, C. PY - 2005 DA - 2005// TI - Models of cooperation based on the prisoner’s dilemma and the snowdrift game JO - Ecol Lett VL - 8 UR - https://doi.org/10.1111/j.1461-0248.2005.00773.x DO - 10.1111/j.1461-0248.2005.00773.x ID - Doebeli2005 ER - TY - JOUR AU - Nadell, C. AU - Foster, K. AU - Xavier, J. PY - 2010 DA - 2010// TI - Emergence of spatial structure in cell groups and the evolution of cooperation JO - PLoS Comput Biol VL - 6 UR - https://doi.org/10.1371/journal.pcbi.1000716 DO - 10.1371/journal.pcbi.1000716 ID - Nadell2010 ER - TY - JOUR AU - Hauert, C. AU - Doebeli, M. PY - 2004 DA - 2004// TI - Spatial structure often inhibits the evolution of cooperation in the snowdrift game JO - Nature VL - 428 UR - https://doi.org/10.1038/nature02360 DO - 10.1038/nature02360 ID - Hauert2004 ER - TY - JOUR AU - Verbruggen, E. AU - Mouden, C. AU - Jansa, J. AU - Akkermans, G. AU - Bücking, H. AU - West, S. A. PY - 2012 DA - 2012// TI - Spatial structure and interspecific cooperation: theory and an empirical test using the mycorrhizal mutualism JO - Am Nat VL - 179 UR - https://doi.org/10.1086/665032 DO - 10.1086/665032 ID - Verbruggen2012 ER - TY - STD TI - Allen B, Gore J, Nowak MA (2013) Spatial dilemmas of diffusible public goods. eLife 2 ID - ref27 ER - TY - JOUR AU - Zambrano, M. AU - Siegele, D. AU - Almiron, M. AU - Tormo, A. AU - Kolter, R. PY - 1993 DA - 1993// TI - Microbial competition: Escherichia coli mutants that take over stationary phase cultures JO - Science VL - 259 UR - https://doi.org/10.1126/science.7681219 DO - 10.1126/science.7681219 ID - Zambrano1993 ER - TY - JOUR AU - Vulic, M. AU - Kolter, R. PY - 2001 DA - 2001// TI - Evolutionary cheating in Escherichia coli stationary phase cultures JO - Genetics VL - 158 ID - Vulic2001 ER - TY - JOUR AU - Finkel, S. E. AU - Kolter, R. PY - 1999 DA - 1999// TI - Evolution of microbial diversity during prolonged starvation JO - Proc Natl Acad Sci VL - 96 UR - https://doi.org/10.1073/pnas.96.7.4023 DO - 10.1073/pnas.96.7.4023 ID - Finkel1999 ER - TY - JOUR AU - Finkel, S. PY - 2006 DA - 2006// TI - Long-term survival during stationary phase: evolution and the gasp phenotype JO - Nat Rev Microbiol VL - 4 UR - https://doi.org/10.1038/nrmicro1340 DO - 10.1038/nrmicro1340 ID - Finkel2006 ER - TY - JOUR AU - Keymer, J. E. AU - Galajda, P. AU - Lambert, G. AU - Liao, D. AU - Austin, R. H. PY - 2008 DA - 2008// TI - Computation of mutual fitness by competing bacteria JO - Proc Natl Acad Sci USA VL - 105 UR - https://doi.org/10.1073/pnas.0810792105 DO - 10.1073/pnas.0810792105 ID - Keymer2008 ER - TY - JOUR AU - Lambert, G. AU - Liao, D. AU - Vyawahare, S. AU - Austin, R. H. PY - 2011 DA - 2011// TI - Anomalous spatial redistribution of competing bacteria under starvation conditions JO - J Bacteriol VL - 193 UR - https://doi.org/10.1128/JB.01430-10 DO - 10.1128/JB.01430-10 ID - Lambert2011 ER - TY - JOUR AU - Kussell, E. PY - 2013 DA - 2013// TI - Evolution in microbes JO - Ann Rev Biophys VL - 42 UR - https://doi.org/10.1146/annurev-biophys-083012-130320 DO - 10.1146/annurev-biophys-083012-130320 ID - Kussell2013 ER - TY - JOUR AU - Patten, C. AU - Kirchhof, M. AU - Schertzberg, M. AU - Morton, R. AU - Schellhorn, H. PY - 2004 DA - 2004// TI - Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12 JO - Mol Genet Genomics VL - 272 UR - https://doi.org/10.1007/s00438-004-1089-2 DO - 10.1007/s00438-004-1089-2 ID - Patten2004 ER - TY - JOUR AU - Dong, T. AU - Kirchhof, M. AU - Schellhorn, H. PY - 2008 DA - 2008// TI - Rpos regulation of gene expression during exponential growth of Escherichia coli k12 JO - Mol Genet Genomics VL - 279 UR - https://doi.org/10.1007/s00438-007-0311-4 DO - 10.1007/s00438-007-0311-4 ID - Dong2008 ER - TY - STD TI - Edelstein A, Amodaj N, Hoover K, Vale R, Stuurman N (2010) Computer control of microscopes using μManager. Curr Protoc Mol Biol 14.20.1–14.20.17 ID - ref37 ER -