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Table 1 Klebsiella pneumoniae strains with a CRISPR/Cas system

From: Survey of clustered regularly interspaced short palindromic repeats and their associated Cas proteins (CRISPR/Cas) systems in multiple sequenced strains of Klebsiella pneumoniae

Strain Origin Genome status Number of CRISPRa Number of spacersa GenBank access no. References
K. pneumoniae subsp. pneumoniae 1084 Liver abscess Complete 2 8 and 14 NC_018522 [21, 22]
K. pneumoniae NTUH-K2044 Liver abscess Complete 2 3 and 22 NC_012731 [23]
K. pneumoniae JHCK1 Meningitis Draft 2 9 and 15 NZ_ANGH02000012 [24, 25]
K. pneumoniae RYC492 Stool Draft 1 11 NZ_APGM01000001 [26, 27]
K. pneumoniae WGLW2 Sputum Draft 1 9 NZ_JH930419 NR
K. pneumoniae WGLW5 Mouse Draft 2 6 and 19 NZ_JH930428 NR
  1. NR no reference, WGLW2 and WGLW5 genomes were submitted by Broad Institute, BioProjects PRJNA181874, PRJNA169454 and PRJNA181876, PRJNA169456 respectively, available in NCBI.
  2. aCRISPR/Cas system was detected with the CRISPRFinder software.