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Table 1 Site tests for positive selection on lineage-specific expansion Or clades

From: Diversification of the ant odorant receptor gene family and positive selection on candidate cuticular hydrocarbon receptors

Clade

na

d bS

2Δlc

M1a vs M2a P value (with Bonferroni correction)

M7 versus M8 (df = 2)

M8a versus M8 (df = 1)

M1a versus M2a (df = 2)

9-exon subfamily

 9-exon Amor1

8

0.40

0.14

0.03

0

1.0

 9-exon Amor2

8

0.54

7.74*

0.08

0

1.0

 9-exon Amor3

13

0.10

7.21*

5.34*

0

1.0

 9-exon Cbir1

13

0.13

20.72**

5.01*

4.27

1.0

 9-exon Cbir2

19

0.12

75.00**

54.45**

62.29**

9.22E-13**

 9-exon Cbir3

9

0.16

16.82**

7.85*

7.79*

0.6290

 9-exon Cbir4

13

0.07

51.78**

47.63**

47.05**

1.88E-09**

 9-exon Cbir5

16

0.07

98.64**

83.20**

84.04**

0**

 9-exon Cbir6

25

0.07

105.71**

98.16**

106.90**

0**

 9-exon Cfor1

6

0.19

29.77**

17.19**

14.61**

0.0021*

 9-exon Cfor2

7

0.14

43.76**

38.44**

37.27**

2.50E-07**

 9-exon Cfor3

7

0.20

8.19*

4.95*

0

1.0

 9-exon Hsal1

7

0.27

2.67

0

0

1.0

 9-exon Hsal2

7

0.14

15.09**

9.93*

12.33*

0.0652

 9-exon Pbar1

9

0.10

8.62*

8.62*

0

1.0

Other subfamilies

 H-Amor1

11

0.39

12.55*

2.32

0

1.0

 J-Amor1

19

0.35

17.60**

0.42

0

1.0

 L-Amor1

14

0.23

8.79*

7.82*

0

1.0

 L-Amor2

7

0.23

3.04

2.08

0

1.0

 L-Amor3

8

0.31

1.60

0.48

0

1.0

 L-Amor4

20

0.20

3.33

0.41

0

1.0

 U-Cbir1

7

0.11

2.10

0.00

0

1.0

 U-Cbir2

6

0.11

6.66*

5.98*

5.19

1.0

 P-Cflo1

31

0.11

30.31**

9.63*

0

1.0

 V-Cflo1

11

0.11

1.02

0.78

0

1.0

 V-Cflo2

7

0.12

14.23**

2.17

2.03

1.0

 E-Hsal1

8

0.18

0.00

0.00

0

1.0

 U-Hsal1

33

0.11

8.72*

0.13

0

1.0

 V-Hsal1

10

0.06

1.09

0.70

0

1.0

 P-Lhum1

7

0.20

6.69*

2.94

0

1.0

 F-Pbar1

6

0.12

1.55

1.30

0.46

1.0

  1. aNumber of sequences in the data set
  2. bMean dS for all branches estimated under M0 model
  3. cLog Likelihood ratios; 2x(lnLH1 − lnLH0)
  4. ** Significant at the 0.1 % level
  5. * Significant at the 5 % level