Table 1 Percentages of the exome target regions by the mapping programs in family exomes at the cutoffs of 5×, 10×, 15× and 20×
From: Challenges in exome analysis by LifeScope and its alternative computational pipelines
Coverage | 5\(\times\) (%) | 10\(\times\) (%) | 15\(\times\) (%) | 20\(\times\) (%) |
|---|---|---|---|---|
LifeScope | 94.28 | 91.29 | 87.69 | 83.56 |
SHRiMP | 93.97 | 89.92 | 84.94 | 79.07 |
MAQ | 90.91 | 85.17 | 78.82 | 71.92 |
BFAST | 86.72 | 78.76 | 70.47 | 62.04 |