Table 2 The main function and protein counts of sequence similarity-based protein families between Chlorobium tepidum (‘cct’) and Pelodictyon phaeoclathratiforme (‘ppb’), for Uniprot protein sets
Groupa | Total proteinsd | cct proteins | ppb proteins | Proposed functionb |
|---|---|---|---|---|
1 | 16 | 0 | 16 | Pentapeptide repeat protein |
3 | 10 | 0 | 10 | Transcriptional regulator, XRE family |
7 | 7 | 0 | 7 | PAS/PAC sensor signal transduction histidine kinase |
8 | 7 | 1 | 6 | TIR domain protein, TPR repeat-containing protein, SEFIR domain protein |
10 | 7 | 0 | 7 | Transcriptional regulator, XRE family |
12 | 6 | 3 | 3 | Magnesium-protoporphyrin methyltransferases, magnesium chelatase |
13 | 6 | 2 | 4 | Multi-sensor histidine kinase |
18 | 6 | 0 | 6 | Plasmid maintenance system antidote protein, XRE family |
19 | 5 | 4 | 1 | Outer surface protein, putative, Hemagglutinin-related protein, Tia invasion determinant-related protein |
20 | 5 | 0 | 5 | Putative transcriptional regulator |
21 | 5 | 1 | 4 | Transcriptional regulator, XRE familyc |
22 | 5 | 0 | 5 | HipA domain protein |
23 | 5 | 0 | 5 | Ribonuclease VapC (RNase VapC) |
24 | 4 | 2 | 2 | Transposase |
25 | 4 | 2 | 2 | Filamentation induced by cAMP protein Fic, Death-on-curing family proteinc |
26 | 4 | 2 | 2 | Excinuclease ABC, A subunit |
27 | 4 | 2 | 2 | Bche/P-methylase family protein, Radical SAM domain protein |
28 | 4 | 3 | 1 | Flp/Fap pilin componentc |
31 | 4 | 2 | 2 | ATP-dependent zinc metalloprotease FtsH |
32 | 4 | 1 | 3 | Probable pyruvoyl-dependent arginine decarboxylase |
34 | 4 | 1 | 3 | Sel1 domain protein repeat-containing proteinc |
35 | 4 | 0 | 4 | RNA-directed DNA polymerase |
37 | 4 | 0 | 4 | YapH protein |
38 | 4 | 0 | 4 | Gas vesicle synthesis GvpLGvpF |
40 | 4 | 0 | 4 | PilT protein domain protein |
41 | 4 | 0 | 4 | Transposase IS4 family protein |