Table 4 Distribution of the CRISPR loci detected in 13 different strains of S. Typhimurium
Strain | Phage type | Accession number | Total no. of spacers in CRISPR loci | Spacers no. In CRISPR-1 (CRISFK-1 coordinates) | Spacers no. In CRISPR-2 (CRISPR-2 coordinates) |
|---|---|---|---|---|---|
UK-1 | DTI | CP002614 | 37 | 14 (3045088–3046075) | 23 (3062207–3063639) |
DT2 | DT2 | HG326213 | 46 | 20 (3035608–3036960) | 26 (3053092–3054707) |
lt2 | DT4 | AE006468 | 55 | 23 (3076611–3078147) | 32 (3094279–3096260) |
SL1344 | DT44 | FQ312003 | 37 | 14 (3099172–3100159) | 23 (3116291–3117723) |
ST4/74 | DT44 | CP002487 | 37 | 14 (3099172–3100159) | 23 (3116291–3117723) |
NCTC13348 | DT104 | HF937208 | 36 | 10 (3111855–3112493) | 26 (3128625–3130239) |
14028S | DT133 | CP001363 | 48 | 22 (3096848–3098323) | 26 (3114455–3116070) |
08–1736 | – | CP006602 | 48 | 22 (4332390–4333865) | 26 (4349997–4351612) |
U288 | U288 | CP003836 | 54 | 22 (3074262–3075737) | 32 (3091869–3093850) |
798 | – | CP003386 | 44 | 22 (3097927–3099324) | 22 (3115456–3116827) |
D23580 | Untypable | FN424405 | 39 | 21 (3069598–3071012) | IS (3087144–3088271) |
T000240 | DT12 | AP011957 | 52 | 20 (3100041–3101393) | 32 (3117525–3119506) |
PB225 | DT8 | ERS640E55 | 31 | 22 | 9 |
MS57 | DT30 | ERS640854 | 31 | 22 | 9 |