Table 1 BLAST+ applications wrapped by blastjs
blastjs function | BLAST+ App | Query | Database |
|---|---|---|---|
Search applications | |||
 blast.blastN | blastn | Nucleotide | nucleotide |
 blast.blastP | blastp | protein | protein |
 blast.blastX | blastx | translated nucleotide | protein |
 blast.tblastN | tblastn | protein | translated nucleotide |
 blast.tblastX | tblastx | translated nucleotide | translated nucleotide |
Database applications | |||
 blast.makeDB | makeblastdb | Generate new BLAST+ database | |