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Table 1 Primers used for the amplification of the large (L) RNA of Tomato spotted wilt virus WA-USA (TSWV WA-USA) isolate

From: Sequence characterization, molecular phylogeny reconstruction and recombination analysis of the large RNA of Tomato spotted wilt virus (Tospovirus: Bunyaviridae) from the United States

Oligonucleotides

Sequence (5′-3′)

Position

in L RNA

Expected

ampliconsize (bp)

TSWVF1

AGAGCAATCAGGTAACAACG

1

2782

TSWVR1

AATCGGACAGTGGCAAAAAC

2782

TSWVF2

GCGCAATTTTCAAAGAAAGC

2572

1822

TSWVR2

AACCAGTTCATGCTAACAGG

4394

TSWVF3

CAGAAGCCATATCTATAAGTGG

4001

2281

TSWVR3

GGTGGATAGGAGAGCCAATG

6282

TSWVF4

GGCAAAGACAGCTTCGAGAC

6082

2832

TSWVR4

AGAGCAATCAGGTACAACTAAAAC

8914