Skip to main content

Table 1 Genes regulated by CSF2 in inner cell mass after adjustment for a false discovery rate of 2 %

From: Regulation of gene expression in the bovine blastocyst by colony stimulating factor 2

Gene symbol or description Mean counts, control Mean counts, CSF2 Fold change, CSF2/control Adjusted P value
Upregulated
 FRMPD3 1.4 21.3 14.71 0.045
 NDNF 1.7 22.8 13.29 0.019
 LAPTM5 43.3 531.8 12.28 0.000
 Olfactory receptor 4A47 (LOC100294956) 4.4 37.2 8.48 0.014
 CYP3A5 37.3 230.9 6.20 0.000
 Serine incorporator 1 pseudogene (LOC781002) 25.2 152.2 6.05 0.000
 TMEM182 17.8 83.6 4.69 0.014
 CSN3 97.6 444.2 4.55 0.000
Downregulated
 MYADM-like (ENSBTAG00000001526) 10.2 0 0.006
 CD68 1156.8 491.9 0.43 0.024
 CFAP54 162.4 69.2 0.43 0.026
 DAG1 345.6 141.4 0.41 0.026
 HSD3B1 183.6 71.7 0.39 0.002
 EKC/KEOPS complex subunit LAGE3 (LOC618023) 87.4 29.9 0.34 0.019
 SEMA4G 127.1 42.5 0.33 0.026
 BAG3 835.4 204.9 0.25 0.028
 PAQR7 187.9 31.5 0.17 0.013
 PAH 56.2 8.8 0.16 0.012
 MUC3A 79.6 12.4 0.16 0.014
 SOX30 85.3 12.6 0.15 0.013
 HSPA6 240.0 29.3 0.12 0.000
 SYNE2 635.1 76.7 0.12 0.000
 OR5T2 88.6 10.1 0.11 0.000
 Olfactory receptor, family 5, subfamily T-like (ENSBTAG00000039348) 11.7 0.6 0.05 0.046
 CMYA5 38.5 2.0 0.05 0.006