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Table 2 Genes regulated by CSF2 in trophectoderm after adjustment for a false discovery rate of 2 %

From: Regulation of gene expression in the bovine blastocyst by colony stimulating factor 2

Gene symbol or description Mean counts, control Mean counts, CSF2 Fold change, CSF2/control Adjusted P value
Upregulated
 CLIC6 0 6.7 0.025
 OR5AN1 0.6 9.7 16.22 0.021
 CSN3 42.4 554.8 13.08 0.000
 Uncharacterized (ENSBTAG00000033304) 11.1 127.5 11.46 0.000
 Exocyst complex component 1-like (LOC100335745) 1.2 9.9 8.09 0.049
 Uncharacterized (ENSBTAG00000040552) 2.9 20.8 7.19 0.012
 HPCAL4 427.9 2667.1 6.23 0.000
 CCDC146 12.9 70.3 5.43 0.000
 DEAD/H box polypeptide 26B-like (LOC100138355) 7.4 34.9 4.72 0.002
 Uncharacterized (LOC100335677) 17.2 68.7 3.99 0.012
 TKTL1 64.6 205.7 3.18 0.001
 FOS 344.1 775.3 2.25 0.042
 DUSP1 897.1 1959.3 2.18 0.008
 SHE 216.5 445.6 2.06 0.018
Downregulated
 SLC25A40-like (LOC510700) 451.6 179.4 0.40 0.045
 AKAP4 104.7 30.0 0.29 0.004
 MUC1 284.2 73.8 0.26 0.000
 VAV3 43.1 10.3 0.24 0.003
 VAV3 52.6 11.5 0.22 0.002
 VAV3 34.1 7.0 0.21 0.001
 PAQR7 341.6 20.1 0.06 0.000
 NPY1R 333.9 18.8 0.06 0.000
 Interferon regulatory factor-like (ENSBTAG00000031214) 26.4 1.4 0.05 0.000