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Table 2 Characteristics of 9 adopted sparid microsatellite DNA loci in 53 specimens of sheepshead (Archosargus probatocephalus) from the Indian River, Florida

From: Isolation and characterization of 24 polymorphic microsatellite loci for the study of genetic population structure of the sheepshead Archosargus probatocephalus (Actinopterygii, Perciformes, Sparidae)

Source organism

Primer sequence (5′→3′) forward/reverse

Repeat motif

Allele size range

Ka

H O

H E

PIC

GenBank accession no.

Ref

Pagrus auratus

GTCCGACTCCACTCCATTCCTCT

GTGCTCGATCCCTTGTGCTGATA

(CTGT)7

124–126

12

0.60

0.63

0.59

AY696589

[18]

Acanthopagrus butcheri

GGTGCGTGCATTGTTAATGTGT

GATCTGCTTTCCTTTGACTCAGC

(TG)24

90–126

15

0.87

0.89

0.87

AF284352

[19]

Acanthopagrus schlegelii

AGGCATTTCCGCACACTAAC

CAAACAAGAGCCTGGAGGAG

(GT)12

198–218

8

0.64

0.63

0.55

AB095014

a

Diplodus vulgaris

GCCGGGCTCGACATTGACACTGAA

GCAGCCAGCAGAGCTTAAAGAACT

(CA)11

260–266

2

0.04

0.04

0.04

EF064291

[20]

Diplodus vulgaris

GCGGTTATGTATACGTTGCGTTTA

TTGGCGTTGAACAGAAGTCAGACA

(CA)13

238–248

3

0.15

0.18

0.17

EF064292

[20]

Pagrus auratus

AATCTTGACAGCGCCCTTTA

GCAGCGCACAGATAAACAAA

(GT)16

156–204

18

0.92

0.89

0.87

AF202881

[21]

Pagrus auratus

GGACAGAGAGGGAGTGGATG

GCTCCTCTGCCTGTATCTGG

(AG)16

216–248

13

0.72

0.92

0.90

AF202885

[21]

Paqrus major

TTCCAATGTGCCTTTATGC

CAAATTCCCAAGGTCATCC

(GT)24

120–128

3

0.11

0.39

0.32

AB042989

[22]

Pagrus auratus

GTGCGTGTGTGTGTGTTGGa

ATCCTCCTCCACTCCATG

(TG)21

160–170

3

0.07

0.38

0.31

AB042989

[22]

 

Mean

  

8.6

0.46

0.55

0.51

 
  1. Four specimens did not amplify for three or more loci and were excised
  2. Ka number of alleles, H O observed heterozygosity, H E expected heterozygosity, PIC polymorphic information content, Ref references
  3. a Direct submission-Jeong et al. (NCBI) 2007