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Table 1 Summary of SSR mining and frequency of different repeat types identified in the examined ESTs from the Prunus species assayed

From: In silico search, characterization and validation of new EST-SSR markers in the genus Prunus

Parameters Values
SSR mining
Total number of EST sequences examined 111,788
Total number of SSRs identified including poly-A and poly-T 55,884
Total number of SSRs after removing poly-A and poly-T 45,764
Number of sequences containing more than 1 SSR 316
Repeat type a
Dinucleotide 12,043 (26.31 %)
Trinucleotide 6675 (14.58 %)
Tetranucleotide 244 (0.53 %)
Pentanucleotide 125 (0.27 %)
Hexanucleotide 68 (0.14 %)
Heptanucleotide 15 (0.03 %)
Octanucleotide 9 (0.01 %)
Nonanucleotide 0 (0)
Decanucleotide 1 (0.002 %)
  1. a Data in parentheses is the percentage value of the repeat type