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Table 2 Proportion of those SNPs shared by one, two, three and four calling methods predicted to successfully validate on both an Illumina Infinium and an Affymetrix Axiom array using using predictive modeling and simple filtering approaches

From: Transcriptomic SNP discovery for custom genotyping arrays: impacts of sequence data, SNP calling method and genotyping technology on the probability of validation success

Share Predicted validation success (%)
Infinium Axiom
Predictive Filtering Predictive Filtering
One 66.8 30.7 91.7 57.0
Two 92.9 57.2 96.7 72.6
Three 89.3 52.5 93.2 68.0
Four 89.9 54.0 93.3 68.2