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Table 1 Summarized TCGA breast cancer biological validation

From: Differential correlation for sequencing data

Treatment Mean rank Median rank Mean q value/FDR
Correlation method comparison
 Spearman 89 56 0.0150
 SparCC 543 387 0.0240
 Pearson 531 512 0.0600
 BWMC 294 275 0.0530
 DiffCorr 502 395 0.2100
3 components vs. 5 components
 3 89 56 0.0150
 5 683 392 0.0007
Standard EM vs. subsampling EM
 Standard EM 89 56 0.0150
 Subsampling EM 92 44 0.0048
  1. Ranks are summarized by mean and median, and q values/FDR are summarized by mean. Values here are based on values in Additional file 1: Table S1