Table 2 T3SS subunits identified as correlation predictors in sPLS analysis
T3SS protein | KEGG | LMY | HMY | P | P adj. BH | Fold change | sPLS coefficient | Sample type |
|---|---|---|---|---|---|---|---|---|
SctC | K03219 | 1.22 | 3.71 | 0.00 | 0.02 | 3.03 | 0.02 | DNA |
SctF | K03221 | 0.06 | 0.05 | 0.92 | 1.00 | 1.22 | na | DNA |
SctJ | K03222 | 0.80 | 2.52 | 0.00 | 0.02 | 3.13 | 0.02 | DNA |
SctL | K03223 | 0.46 | 1.31 | 0.00 | 0.01 | 2.83 | 0.02 | DNA |
SctN ATP synthase | K03224 | 2.47 | 8.32 | 0.00 | 0.01 | 3.37 | 0.02 | DNA |
SctQ | K03225 | 0.04 | 0.07 | 0.00 | 0.05 | 1.95 | 0.02 | DNA |
SctR | K03226 | 1.23 | 3.78 | 0.00 | 0.01 | 3.06 | 0.01 | DNA |
SctS | K03227 | 0.46 | 1.54 | 0.00 | 0.01 | 3.33 | 0.02 | DNA |
SctT | K03228 | 1.11 | 3.57 | 0.00 | 0.01 | 3.21 | 0.01 | DNA |
SctU | K03229 | 1.60 | 5.05 | 0.00 | 0.01 | 3.16 | 0.02 | DNA |
SctV | K03230 | 3.68 | 12.22 | 0.00 | 0.01 | 3.32 | 0.02 | DNA |
SctO | K04056 | 0.11 | 0.30 | 0.00 | 0.05 | 2.72 | 0.02 | DNA |
SctP | K04057 | 0.01 | 0.00 | 0.65 | 1.00 | 1.23 | na | DNA |
SctW | K04058 | 0.17 | 0.40 | 0.00 | 0.05 | 2.33 | 0.02 | DNA |
SctX | K04059 | 0.02 | 0.04 | 0.14 | 0.63 | 1.91 | na | DNA |
SctC | K03219 | 0.21 | 0.34 | 0.02 | 0.14 | 1.62 | na | RNA |
SctF | K03221 | 0.04 | 0.03 | 0.71 | 0.84 | 1.30 | na | RNA |
SctJ | K03222 | 0.28 | 0.79 | 0.01 | 0.09 | 2.78 | na | RNA |
SctL | K03223 | 0.04 | 0.07 | 0.37 | 0.56 | 1.91 | na | RNA |
SctN ATP synthase | K03224 | 0.73 | 1.99 | 0.00 | 0.07 | 2.71 | na | RNA |
SctR | K03226 | 0.18 | 0.62 | 0.00 | 0.04 | 3.41 | 0.03 | RNA |
SctS | K03227 | 0.08 | 0.24 | 0.01 | 0.07 | 3.03 | na | RNA |
SctT | K03228 | 0.04 | 0.15 | 0.01 | 0.12 | 3.38 | na | RNA |
SctU | K03229 | 0.23 | 0.38 | 0.07 | 0.23 | 1.63 | na | RNA |
SctV | K03230 | 0.98 | 2.42 | 0.00 | 0.03 | 2.47 | na | RNA |
SctW | K04058 | 0.03 | 0.04 | 0.56 | 0.73 | 1.24 | na | RNA |