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Table 4 Effective T3 predictions of chaperone binding, secreted, N-terminal signal and T4SS proteins with protein coding sequences of Succinivibrio dextrinosolvens

From: Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep

Strain

Conserved chaperone binding (within/outside expected region)

Secreted T3SS

N-terminal signal (ER/mitochondrial)

T4SS effector

H5

111 (40/71)

254

447 (412/35)

126

22B

115 (36/79)

288

500 (452/48)

164

ACV-10

111 (35/76)

282

534 (493/41)

148