Table 1 Differential expression of P. fluorescens In5 genes during an interaction with R. solani compared to P. aphanidermatum
Locus tag | Protein name | Fold change | Fold change |
|---|---|---|---|
R. solani | P. aphanidermatum | ||
AL066_06105 | Alpha/beta hydrolase | 239.5 | 1.0 |
AL066_09895 | Hydrolase | 194.8 | −1.0 |
AL066_14420 | Quercetin 2,3-dioxygenase | 188.8 | 1.5 |
AL066_18305 | FMN-dependent NADH-azoreductase | 142.0 | −1.1 |
AL066_05010 | Hypothetical protein | 45.9 | 1.0 |
AL066_10105 | Pirin | 43.4 | −1.1 |
AL066_04230 | Aromatic ring-opening dioxygenase LigB | 39.4 | −1.1 |
AL066_06100 | Mechanosensitive ion channel protein MscS | 37.8 | 1.1 |
AL066_31290 | Hypothetical protein | 34.2 | −1.1 |
AL066_13550 | Phage infection protein | 32.4 | −1.1 |
AL066_14055 | Hypothetical protein | 27.6 | −1.0 |
AL066_13570 | Hypothetical protein | 27.1 | −1.1 |
AL066_05530 | Glutathionyl-hydroquinone reductase YqjG | 23.5 | −1.0 |
AL066_06700 | Hypothetical protein | 20.4 | −1.3 |
AL066_06705 | Hypothetical protein | 17.4 | −1.3 |
AL066_12150 | Hypothetical protein | 17.4 | −1.3 |
AL066_12145 | Hypothetical protein | 15.3 | −1.1 |
AL066_07630 | Hypothetical protein | 15.1 | −1.3 |
AL066_07090 | ATPase | 15.1 | 1.2 |
AL066_13695 | Hypothetical protein | 10.6 | −1.1 |
AL066_31095 | Filamentous hemagglutinin | 10.4 | 1.2 |
AL066_10590 | FMN-dependent NADH-azoreductase | 10.1 | 1.1 |
AL066_31575 | Quercetin 2,3-dioxygenase | 6.8 | 1.0 |
AL066_04065 | DoxX family protein | 5.9 | 1.1 |
AL066_07095 | Histidine kinase | 4.8 | 1.0 |
AL066_22770 | Hypothetical protein | 4.6 | −1.2 |
AL066_12155 | Hypothetical protein | 4.6 | −1.7 |
AL066_03355 | ABC transporter | 4.2 | −1.0 |
AL066_27880 | Cytochrome b | 3.5 | −1.2 |
AL066_11190 | Oxidoreductase | −3.0 | −2.0 |
AL066_11490 | Hypothetical protein | −3.0 | −1.2 |
AL066_26360 | AlpA family transcriptional regulator | −3.5 | −3.3 |
AL066_11195 | Sulfite reductase | −3.5 | −2.0 |
AL066_13155 | NIPSNAP domain containing protein | −4.1 | −1.3 |
AL066_11200 | Cytochrome C oxidase Cbb3 | −4.3 | −2.6 |
AL066_11050 | (Fe–S)-binding protein | −4.6 | −1.7 |