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Table 2 Characterization of 16 polymorphic microsatellites for the rock ptarmigan (regular font) and the willow grouse (italics)

From: Development and evaluation of 16 new microsatellite loci for the rock ptarmigan (Lagopus muta) and cross-species amplification for the willow grouse (L. lagopus)

Locus name

Repeat motif of cloned allele

GenBank accession number

Primer sequence (5′–3′)

Primer dye

Allele size range (bp)

Na

H E

H O

Mut01

(ATCC)8

MF425753

F: GGTCACTTGTGGCTATTAGAACC

PET

85–104

6

0.6545

0.6129 [0.0016]**

R: CTGAGAAAGACAATGGTGGATGG

85115

8

0.7361

0.6667 [0.0606]

Mut02

(ATCC)9

MF425754

F: GATGGATGAACAGACAGTGGATG

FAM

99–127

8

0.6454

0.6984 [0.7326]

R: CACTCACTTGCTTATATGATTCCC

103127

6

0.7243

0.5366 [0.0001]***

Mut03

(AAAC)7

MF425755

F: TCACTAAATCATGGAAAGCAATGG

NED

100–116

5

0.6925

0.7069 [0.8376]

R: GGTGAGGTGGATTATCATATGCAG

NA

NA

NA

NA

Mut04

(ATCC)11

MF425756

F: AACATGGTCCTACACTTCAGAGG

VIC

107–131

6

0.7602

0.8571 [0.9064]

R: ATGTACACAAGGAAGCATTCAGG

115151

8

0.8324

0.8421 [0.2652]

Mut06

(AAAC)7

MF425757

F: TTGAACACTAATCTCGCCATTGC

PET

110–130

6

0.6983

0.6984 [0.5816]

R: GTGGGATATGAGGAAAGAGTTGC

114126

4

0.5541

0.2093 [0.0001]***

Mut08

(AAGC)6

MF425758

F: TACTACTTTCTGAACTCTGCTGC

VIC

122–176

9

0.8332

0.7705 [0.0032]*

R: GAGAGAAGAAGGAACAAACAAGC

122201

11

0.8722

0.7105 [0.0037]*

Mut09

(AGAT)10

MF425759

F: CACTCTAGTTCAACCTGTTCAGC

VIC

125–161

8

0.8083

0.7931 [0.3421]

R: CTCTTAGAGAATTTGCTGCTGTG

125153

8

0.8072

0.4250 [0.0000]***

Mut12

(AAAC)6

MF425760

F: GGAAGGAGCTTACACATAGGAAC

NED

123–150

7

0.7448

0.5932 [0.0000]**

R: GGAGGATCTTGTACTTGCAGTTG

146154

6

0.5971

0.5814 [0.4043]

Mut14

(AAAC)5

MF425761

F: TCTGCCAACTTCTTTATGCTGTC

FAM

154–174

6

0.6596

0.6825 [0.4565]

R: TTCTTTCAATTCATTAGCCCAGTG

148160

4

0.1358

0.0952 [0.0478]*

Mut16

(AGAT)12

MF425762

F: TGCTGTAATTGGCTAGTGGTTTC

NED

155–171

5

0.6658

0.6452 [0.4086]

R: CGGTCAGGTGTTTCTCAGTAAAG

151183

9

0.8164

0.7209 [0.0275]*

Mut17

(AAAG)15

MF425763

F: CCAAGAACACAGAAATCCCAGAG

PET

134–226

18

0.7586

0.6207 [0.0105]*

R: TGTTAATTGACTGCCACAAACTAC

126174

5

0.4207

0.3514 [0.1756]

Mut18

(AAAC)6

MF425764

F: TTCACTCATAACTAAGCAAAGCAG

FAM

171–183

4

0.6122

0.5690 [0.0747]

R: TGCATTGGAATTACTGTTGATGC

178183

3

0.4436

0.4048 [0.3302]

Mut20

(ATCC)13

MF425765

F: CTTTCCACCTTTCTTACTGCCTG

PET

173–213

11

0.8692

0.7500 [0.0068]*

R: CTCATCCTGTATTTCTGAGCTGC

157217

13

0.8430

0.7143 [0.0344]*

Mut22

(AAAC)6

MF425766

F: GTGGTATCTCTGTAACTTGGGAG

FAM

179–195

3

0.4259

0.4444 [0.6885]

R: AAGGCAAAGCAAGAATGTCTGTG

179191

4

0.6684

0.6098 [0.2344]

Mut23

(AGAT)9

MF425767

F: CTGGAGTCTAGAATTGCCACAAC

NED

173–209

10

0.8206

0.7833 [0.1645]

R: AGGGTCAAGAACTTACAATGGAC

173197

7

0.7064

0.7027 [0.3735]

Mut24

(AAAG)5

MF425768

F: AACTGACAATCAAGCATCTCATG

PET

198–202

2

0.1244

0.1333 [1.0000]

R: CTGCTATGTACTACTCAAGGTGC

NA

NA

NA

NA

  1. NA, no available data for the species; Na, number of observed alleles; HO, observed heterozygosity; HE, expected heterozygosity
  2. Brackets: p values for the exact tests of departure from Hardy–Weinberg proportions (H1 heterozygosity deficit)
  3. * p < 0.05, ** p < 0.0031 (Bonferroni correction for the rock ptarmigan), *** p < 0.0033 (Bonferroni correction for the willow grouse)