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Table 1 Overview of data files/data sets

From: Hereditary hearing loss SNP-microarray pilot study

Label Name of data file/data set File types (file extension) Data repository and identifier (DOI or accession number)
Data set 1 Infinium HumanOmni1-Quad v1.0 SNP-microarray data This dataset contains the raw intensity data files (Grn.idat and Red.idat) of each patient, as well as Matrix Signal Intensities (.txt) and Matrix Processed data (.txt) NCBI Gene Expression Omnibus
Data series accession: GSE111131
Data identifiers:
GSM3022603, GSM3022604, GSM3022605, GSM3022606, GSM3022607, GSM3022608, GSM3022609, GSM3022610, GSM3022611, GSM3022612, GSM3022613, GSM3022614, GSM3022615, GSM3022616, GSM3022617, GSM3022618, GSM3022619, GSM3022620, GSM3022621, GSM3022622, GSM3022623, GSM3022624, GSM3022625, GSM3022626, GSM3022627, GSM3022628, GSM3022629, GSM3022630, GSM3022631, GSM3022632, GSM3022633, GSM3022634, GSM3022635, GSM3022636, GSM3022637, GSM3022638, GSM3022639, GSM3022640, GSM3022641, GSM3022642, GSM3022643, GSM3022644, GSM3022645, GSM3022646, GSM3022647, GSM3022648, GSM3022649, GSM3022650, GSM3022651, GSM3022652, GSM3022653, GSM3022654, GSM3022655, GSM3022656, GSM3022657, GSM3022658, GSM3022659, GSM3022660, GSM3022661, GSM3022662, GSM3022663, GSM3022664, GSM3022665, GSM3022666, GSM3022667, GSM3022668, GSM3022669, GSM3022670, GSM3022671, GSM3022672, GSM3022673, GSM3022674, GSM3022675, GSM3022676, GSM3022677, GSM3022678, GSM3022680, GSM3022681, GSM3022682, GSM3022683, GSM3022684, GSM3022685, GSM3022686, GSM3022687, GSM3022688, GSM3022689, GSM3022690, GSM3022691, GSM3022692, GSM3022693, GSM3022694, GSM3022695, GSM3022696, GSM3022697, GSM3022698, GSM3022699, GSM3022700, GSM3022701, GSM3022702, GSM3022703, GSM3022704, GSM3022705, GSM3022706, GSM3022707, GSM3022708, GSM3022709, GSM3022710, GSM3022711
GSE111131_Martix_signal_intensities.txt.gz
GSE111131_Matrix_Processed.txt.gz
Data file 1 Data file 1: clinical overview
Details: this table provides an overview of the audiological and clinical characteristics of each anonymized patient, as well as patient population background and familial relationships, if present
This file is available as an excel (.xls) table NCBI Gene Expression Omnibus
Data series accession: GSE111131
Data identifier: GSE111131_Data_file_1.xls.gz
Data file 2 Data file 2: sample sheet all
Details: this table contains the sample sheet that includes the patient sex and anonymized ID with the beadchip position and barcode information and parental relationships, if present
This file is available as a comma separated variables (.csv) table NCBI Gene Expression Omnibus
Data series accession: GSE111131
Data identifier: GSE111131_Data_file_2.csv.gz