Table 1 Overview of data files/data sets
Label | Name of data file/data set | File types (file extension) | Data repository and identifier (DOI or accession number) |
|---|---|---|---|
Data set 1 | Infinium HumanOmni1-Quad v1.0 SNP-microarray data | This dataset contains the raw intensity data files (Grn.idat and Red.idat) of each patient, as well as Matrix Signal Intensities (.txt) and Matrix Processed data (.txt) | NCBI Gene Expression Omnibus Data series accession: GSE111131 Data identifiers: GSM3022603, GSM3022604, GSM3022605, GSM3022606, GSM3022607, GSM3022608, GSM3022609, GSM3022610, GSM3022611, GSM3022612, GSM3022613, GSM3022614, GSM3022615, GSM3022616, GSM3022617, GSM3022618, GSM3022619, GSM3022620, GSM3022621, GSM3022622, GSM3022623, GSM3022624, GSM3022625, GSM3022626, GSM3022627, GSM3022628, GSM3022629, GSM3022630, GSM3022631, GSM3022632, GSM3022633, GSM3022634, GSM3022635, GSM3022636, GSM3022637, GSM3022638, GSM3022639, GSM3022640, GSM3022641, GSM3022642, GSM3022643, GSM3022644, GSM3022645, GSM3022646, GSM3022647, GSM3022648, GSM3022649, GSM3022650, GSM3022651, GSM3022652, GSM3022653, GSM3022654, GSM3022655, GSM3022656, GSM3022657, GSM3022658, GSM3022659, GSM3022660, GSM3022661, GSM3022662, GSM3022663, GSM3022664, GSM3022665, GSM3022666, GSM3022667, GSM3022668, GSM3022669, GSM3022670, GSM3022671, GSM3022672, GSM3022673, GSM3022674, GSM3022675, GSM3022676, GSM3022677, GSM3022678, GSM3022680, GSM3022681, GSM3022682, GSM3022683, GSM3022684, GSM3022685, GSM3022686, GSM3022687, GSM3022688, GSM3022689, GSM3022690, GSM3022691, GSM3022692, GSM3022693, GSM3022694, GSM3022695, GSM3022696, GSM3022697, GSM3022698, GSM3022699, GSM3022700, GSM3022701, GSM3022702, GSM3022703, GSM3022704, GSM3022705, GSM3022706, GSM3022707, GSM3022708, GSM3022709, GSM3022710, GSM3022711 GSE111131_Martix_signal_intensities.txt.gz GSE111131_Matrix_Processed.txt.gz |
Data file 1 | Data file 1: clinical overview Details: this table provides an overview of the audiological and clinical characteristics of each anonymized patient, as well as patient population background and familial relationships, if present | This file is available as an excel (.xls) table | NCBI Gene Expression Omnibus Data series accession: GSE111131 Data identifier: GSE111131_Data_file_1.xls.gz |
Data file 2 | Data file 2: sample sheet all Details: this table contains the sample sheet that includes the patient sex and anonymized ID with the beadchip position and barcode information and parental relationships, if present | This file is available as a comma separated variables (.csv) table | NCBI Gene Expression Omnibus Data series accession: GSE111131 Data identifier: GSE111131_Data_file_2.csv.gz |