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Table 1 Transcriptomic comparison between fresh TNBC cells and their freeze/thawed counterparts

From: Tumor analysis: freeze–thawing cycle of triple-negative breast cancer cells alters tumor CD24/CD44 profiles and the percentage of tumor-infiltrating immune cells

ProbeId Gene name logFC FC t P value Adj. P val B DESC ENTREZID ENSEMBL BT133_fresh BT134_fresh BT138_fresh BT133_thawed BT134_thawed BT138_thawed
10216_at PRG4 2.97 7.81 2.57 0.04 0.85 − 4.41 Proteoglycan 4 10216.00 ENSG00000116690 5.18 3.84 5.88 8.73 5.41 9.64
664613_at MIR544A 2.46 5.48 4.28 0.00 0.85 − 4.29 MicroRNA 544a 664613.00 ENSG00000207587 4.13 2.41 2.94 4.70 6.14 6.01
767568_at SNORD113-8 2.42 5.35 2.56 0.04 0.85 − 4.41 Small nucleolar RNA, C/D box 113-8 767568.00 ENSG00000200367 3.96 3.09 3.01 4.14 5.27 7.91
407000_at MIR218-1 2.31 4.95 2.71 0.03 0.85 − 4.40 MicroRNA 218-1 407000.00 ENSG00000207732 4.05 3.62 3.13 4.19 5.86 7.67
102723604_at LOC102723604 2.14 4.42 3.04 0.02 0.85 − 4.37 Uncharacterized LOC102723604 102723604.00 ENSG00000258928 5.04 3.47 5.05 5.37 6.98 7.63
105369519_at LOC105369519 2.08 4.22 2.52 0.04 0.85 − 4.42 Uncharacterized LOC105369519 105369519.00 NA 2.96 3.41 3.46 3.78 5.09 7.19
2633_at GBP1 2.06 4.17 2.62 0.04 0.85 − 4.41 Guanylate binding protein 1 2633.00 ENSG00000117228 5.85 3.16 3.90 6.79 6.98 5.32
26822_at SNORD14A 2.05 4.13 3.54 0.01 0.85 − 4.33 Small nucleolar RNA, C/D box 14A 26822.00 ENSG00000272034 5.95 3.94 4.02 6.68 7.05 6.30
767579_at SNORD114-3 1.99 3.97 2.87 0.03 0.85 − 4.38 Small nucleolar RNA, C/D box 114-3 767579.00 ENSG00000201839 4.05 2.30 2.54 5.67 5.51 3.68
342908_at ZNF404 1.78 3.44 4.01 0.01 0.85 − 4.30 Zinc finger protein 404 342908.00 ENSG00000176222 5.56 5.29 4.22 7.18 6.18 7.07
107983995_at NA 1.65 3.14 3.44 0.01 0.85 − 4.34 NA NA NA 3.95 3.77 3.77 5.11 4.74 6.58
767606_at SNORD114-26 1.64 3.11 3.43 0.01 0.85 − 4.34 Small nucleolar RNA, C/D box 114-26 767606.00 ENSG00000200413 3.98 2.44 2.47 5.02 4.20 4.59
664612_at MIR539 1.57 2.98 3.38 0.01 0.85 − 4.34 MicroRNA 539 664612.00 ENSG00000202560 7.15 7.17 7.22 7.77 8.84 9.66
54518_at APBB1IP 1.57 2.97 2.52 0.04 0.85 − 4.42 Amyloid beta precursor protein binding family B member 1 interacting protein 54518.00 ENSG00000077420 6.12 3.54 4.64 6.29 6.31 6.39
100033820_at SNORD116-28 1.53 2.88 2.46 0.05 0.85 − 4.42 Small nucleolar RNA, C/D box 116-28 100033820.00 ENSG00000278123 4.08 2.25 3.17 4.17 4.15 5.75
8404_at SPARCL1 1.48 2.78 2.65 0.04 0.85 − 4.40 SPARC like 1 8404.00 ENSG00000152583 6.89 4.74 5.71 7.73 7.09 6.94
100289635_at ZNF605 1.45 2.73 3.65 0.01 0.85 − 4.32 Zinc finger protein 605 100289635.00 ENSG00000196458 6.09 4.60 5.45 7.06 6.56 6.86
105376805_at LOC105376805 1.41 2.66 3.09 0.02 0.85 − 4.36 Uncharacterized LOC105376805 105376805.00 ENSG00000238142 4.47 4.24 3.96 4.62 6.27 6.01
100128002_at LOC100128002 1.41 2.66 2.52 0.04 0.85 − 4.42 Uncharacterized LOC100128002 100128002.00 NA 3.36 3.72 3.03 4.18 6.05 4.11
158131_at OR1Q1 1.36 2.57 2.49 0.05 0.85 − 4.42 Olfactory receptor family 1 subfamily Q member 1 158131.00 ENSG00000165202 3.88 2.84 3.53 5.66 3.69 5.00
100616251_at MIR1587 1.36 2.57 2.60 0.04 0.85 − 4.41 MicroRNA 1587 100616251.00 ENSG00000263972 4.55 4.60 4.25 5.02 5.44 7.03
106481206_at RNU6-94P 1.31 2.47 2.59 0.04 0.85 − 4.41 RNA, U6 small nuclear 94, pseudogene 106481206.00 NA 3.97 3.61 3.31 5.37 3.82 5.62
57562_at CEP126 1.30 2.46 4.04 0.01 0.85 − 4.30 Centrosomal protein 126 57562.00 ENSG00000110318 4.80 3.93 4.71 6.19 5.70 5.45
5170_at PDPK1 1.29 2.44 2.47 0.05 0.85 − 4.42 3-Phosphoinositide dependent protein kinase 1 5170.00 ENSG00000140992 4.17 3.49 3.67 6.09 5.04 4.07
26787_at SNORD61 1.28 2.43 3.60 0.01 0.85 − 4.33 Small nucleolar RNA, C/D box 61 26787.00 ENSG00000206979 2.63 2.18 3.34 3.57 4.13 4.28
26770_at SNORD79 1.23 2.35 2.91 0.03 0.85 − 4.38 Small nucleolar RNA, C/D box 79 26770.00 NA 5.33 4.32 5.01 6.87 5.94 5.55
90499_at FAM95A 1.22 2.32 2.49 0.05 0.85 − 4.42 Family with sequence similarity 95 member A 90499.00 NA 3.93 3.53 3.65 4.23 4.49 6.04
100126355_at MIR365A 1.20 2.30 2.60 0.04 0.85 − 4.41 MicroRNA 365a 100126355.00 ENSG00000199130 5.26 3.96 4.05 6.12 4.97 5.78
441728_at LOC441728 1.20 2.29 3.29 0.02 0.85 − 4.35 Golgin-like pseudogene 441728.00 NA 3.29 3.39 3.15 4.38 3.82 5.21
5228_at PGF 1.19 2.28 2.78 0.03 0.85 − 4.39 Placental growth factor 5228.00 ENSG00000119630 3.93 3.80 5.04 4.97 5.99 5.36
619564_at SNORD72 1.17 2.24 3.08 0.02 0.85 − 4.36 Small nucleolar RNA, C/D box 72 619564.00 ENSG00000212296 2.29 1.80 1.89 2.94 3.95 2.60
168667_at BMPER 1.15 2.21 5.79 0.00 0.85 − 4.24 BMP binding endothelial regulator 168667.00 ENSG00000164619 4.90 4.78 4.60 6.05 5.64 6.02
64853_at AIDA 1.15 2.21 2.51 0.05 0.85 − 4.42 Axin interactor, dorsalization associated 64853.00 ENSG00000186063 4.41 2.58 3.68 4.84 4.63 4.64
100462981_at MTRNR2L2 1.15 2.21 2.64 0.04 0.85 − 4.40 MT-RNR2-like 2 100462981.00 ENSG00000269028 2.95 2.61 3.15 3.89 3.31 4.95
100379296_at RNY4P13 1.14 2.20 3.05 0.02 0.85 − 4.37 RNA, Ro-associated Y4 pseudogene 13 100379296.00 NA 3.42 3.02 3.47 4.06 4.02 5.24
100873920_at NHS-AS1 1.12 2.17 4.52 0.00 0.85 − 4.28 NHS antisense RNA 1 100873920.00 ENSG00000230020 3.29 2.94 3.06 3.81 4.57 4.27
340527_at NHSL2 1.11 2.16 3.27 0.02 0.85 − 4.35 NHS like 2 340527.00 ENSG00000204131 4.91 4.01 4.04 5.86 5.05 5.38
7857_at SCG2 1.10 2.15 3.01 0.02 0.85 − 4.37 Secretogranin II 7857.00 ENSG00000171951 4.11 3.41 4.48 5.64 4.83 4.84
503582_at ARGFX 1.10 2.14 2.84 0.03 0.85 − 4.39 Arginine-fifty homeobox 503582.00 ENSG00000186103 2.98 2.69 2.91 3.90 3.24 4.74
574494_at MIR521-1 1.10 2.14 2.91 0.03 0.85 − 4.38 MicroRNA 521-1 574494.00 ENSG00000207634 3.23 3.03 3.58 3.92 4.03 5.17
26022_at TMEM98 1.08 2.12 4.33 0.00 0.85 − 4.29 Transmembrane protein 98 26022.00 ENSG00000006042 4.10 3.42 3.55 4.73 4.57 5.03
343521_at TCTEX1D4 1.08 2.11 5.33 0.00 0.85 − 4.25 Tctex1 domain containing 4 343521.00 ENSG00000188396 4.98 4.86 4.69 5.83 6.19 5.73
4919_at ROR1 1.07 2.10 2.78 0.03 0.85 − 4.39 Receptor tyrosine kinase like orphan receptor 1 4919.00 ENSG00000185483 4.27 4.19 5.12 6.24 5.25 5.30
440910_at LOC440910 1.07 2.09 5.58 0.00 0.85 − 4.24 Uncharacterized LOC440910 440910.00 ENSG00000231431 4.11 3.73 3.77 5.05 4.78 4.98
105373893_at LOC105373893 1.06 2.09 3.87 0.01 0.85 − 4.31 Uncharacterized LOC105373893 105373893.00 NA 2.54 3.11 3.03 3.60 4.36 3.91
105375249_at LOC105375249 1.06 2.08 2.92 0.03 0.85 − 4.38 Uncharacterized LOC105375249 105375249.00 NA 3.06 2.60 2.85 3.12 4.33 4.23
84973_at SNHG7 1.03 2.05 2.97 0.02 0.85 − 4.37 Small nucleolar RNA host gene 7 84973.00 ENSG00000233016 4.84 4.29 4.02 5.62 4.82 5.81
400728_at FAM87B 1.03 2.04 3.33 0.02 0.85 − 4.35 Family with sequence similarity 87 member B 400728.00 ENSG00000177757 4.65 4.11 4.01 5.48 4.76 5.63
283685_at GOLGA6L2 1.03 2.04 2.49 0.05 0.85 − 4.42 Golgin A6 family-like 2 283685.00 ENSG00000174450 4.22 4.06 4.06 4.52 4.84 6.07
9376_at SLC22A8 1.01 2.02 3.32 0.02 0.85 − 4.35 Solute carrier family 22 member 8 9376.00 ENSG00000149452 3.30 3.43 3.29 4.09 3.97 5.00
9787_at DLGAP5 − 1.00 − 2.00 − 2.66 0.04 0.85 − 4.40 DLG associated protein 5 9787.00 ENSG00000126787 5.91 5.43 4.60 4.59 4.40 3.95
5709_at PSMD3 − 1.00 − 2.00 − 3.12 0.02 0.85 − 4.36 Proteasome 26S subunit, non-ATPase 3 5709.00 ENSG00000108344 6.23 6.90 7.03 5.88 6.05 5.23
5154_at PDGFA − 1.00 − 2.00 − 3.42 0.01 0.85 − 4.34 Platelet derived growth factor subunit A 5154.00 ENSG00000197461 5.01 6.02 5.81 4.54 4.60 4.69
163050_at ZNF564 − 1.00 − 2.00 − 3.74 0.01 0.85 − 4.32 Zinc finger protein 564 163050.00 ENSG00000249709 5.69 6.30 6.20 4.67 5.30 5.22
7405_at UVRAG − 1.00 − 2.01 − 2.59 0.04 0.85 − 4.41 UV radiation resistance associated 7405.00 ENSG00000198382 6.49 7.01 7.35 6.44 6.17 5.23
283624_at LINC00641 − 1.01 − 2.01 − 3.15 0.02 0.85 − 4.36 Long intergenic non-protein coding RNA 641 283624.00 ENSG00000258441 5.99 6.25 6.36 5.41 5.63 4.55
3931_at LCAT − 1.01 − 2.01 − 5.27 0.00 0.85 − 4.25 Lecithin-cholesterol acyltransferase 3931.00 ENSG00000213398 5.49 5.73 5.80 4.83 4.71 4.45
1318_at SLC31A2 − 1.01 − 2.01 − 2.96 0.02 0.85 − 4.38 Solute carrier family 31 member 2 1318.00 ENSG00000136867 5.63 6.51 6.83 5.56 5.17 5.21
4771_at NF2 − 1.01 − 2.02 − 2.70 0.03 0.85 − 4.40 Neurofibromin 2 4771.00 ENSG00000186575 5.54 6.07 5.83 5.22 5.18 4.00
54947_at LPCAT2 − 1.01 − 2.02 − 2.51 0.05 0.85 − 4.42 Lysophosphatidylcholine acyltransferase 2 54947.00 ENSG00000087253 5.56 6.63 7.04 5.19 5.34 5.67
1978_at EIF4EBP1 − 1.01 − 2.02 − 2.98 0.02 0.85 − 4.37 Eukaryotic translation initiation factor 4E binding protein 1 1978.00 ENSG00000187840 5.94 6.91 6.67 5.68 5.79 5.01
407043_at MIR7-1 − 1.02 − 2.02 − 3.21 0.02 0.85 − 4.36 MicroRNA 7-1 407043.00 ENSG00000284179 4.77 5.46 5.67 4.54 3.86 4.46
8893_at EIF2B5 − 1.02 − 2.03 − 2.44 0.05 0.85 − 4.42 Eukaryotic translation initiation factor 2B subunit epsilon 8893.00 ENSG00000145191 6.73 7.46 6.76 6.48 6.28 5.13
205564_at SENP5 − 1.02 − 2.03 − 2.45 0.05 0.85 − 4.42 SUMO1/sentrin specific peptidase 5 205564.00 ENSG00000119231 6.72 6.75 7.15 6.53 6.06 4.98
2305_at FOXM1 − 1.02 − 2.03 − 2.84 0.03 0.85 − 4.39 Forkhead box M1 2305.00 ENSG00000111206 5.61 5.60 5.15 4.64 4.96 3.71
113263_at GLCCI1 − 1.02 − 2.03 − 2.65 0.04 0.85 − 4.40 Glucocorticoid induced 1 113263.00 ENSG00000106415 6.15 6.57 6.53 6.11 5.41 4.66
2030_at SLC29A1 − 1.03 − 2.04 − 2.60 0.04 0.85 − 4.41 Solute carrier family 29 member 1 (Augustine blood group) 2030.00 ENSG00000112759 5.22 6.50 6.64 5.02 5.06 5.20
6660_at SOX5 − 1.03 − 2.04 − 4.88 0.00 0.85 − 4.27 SRY-box 5 6660.00 ENSG00000134532 4.32 3.94 4.54 3.13 3.33 3.24
144100_at PLEKHA7 − 1.03 − 2.04 − 2.57 0.04 0.85 − 4.41 Pleckstrin homology domain containing A7 144100.00 ENSG00000166689 3.85 5.38 4.81 3.67 3.85 3.44
23248_at RPRD2 − 1.03 − 2.04 − 2.45 0.05 0.85 − 4.42 Regulation of nuclear pre-mRNA domain containing 2 23248.00 ENSG00000163125 6.94 7.36 7.59 6.80 6.62 5.38
26273_at FBXO3 − 1.03 − 2.05 − 3.22 0.02 0.85 − 4.35 F-box protein 3 26273.00 ENSG00000110429 5.28 6.10 6.40 5.06 4.69 4.94
57037_at ANKMY2 − 1.03 − 2.05 − 2.84 0.03 0.85 − 4.39 Ankyrin repeat and MYND domain containing 2 57037.00 ENSG00000106524 5.45 6.12 5.33 5.19 4.55 4.06
9701_at PPP6R2 − 1.04 − 2.05 − 2.88 0.03 0.85 − 4.38 Protein phosphatase 6 regulatory subunit 2 9701.00 ENSG00000100239 5.03 5.51 5.22 4.64 4.56 3.46
10564_at ARFGEF2 − 1.04 − 2.05 − 2.46 0.05 0.85 − 4.42 ADP ribosylation factor guanine nucleotide exchange factor 2 10564.00 ENSG00000124198 7.10 7.70 7.10 6.75 6.66 5.37
79005_at SCNM1 − 1.04 − 2.06 − 3.37 0.01 0.85 − 4.34 Sodium channel modifier 1 79005.00 ENSG00000163156 4.53 4.80 5.40 4.27 3.81 3.54
6558_at SLC12A2 − 1.04 − 2.06 − 2.88 0.03 0.85 − 4.38 Solute carrier family 12 member 2 6558.00 ENSG00000064651 7.47 8.24 7.42 7.15 6.77 6.09
377677_at CA13 − 1.05 − 2.06 − 3.02 0.02 0.85 − 4.37 Carbonic anhydrase 13 377677.00 ENSG00000185015 3.82 4.88 4.77 3.82 3.32 3.19
10678_at B3GNT2 − 1.05 − 2.07 − 5.23 0.00 0.85 − 4.25 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 10678.00 ENSG00000170340 6.95 7.17 7.39 6.29 5.94 6.15
6641_at SNTB1 − 1.05 − 2.07 − 2.91 0.03 0.85 − 4.38 syntrophin beta 1 6641.00 ENSG00000172164 6.23 7.02 7.18 5.99 6.09 5.19
51050_at PI15 − 1.06 − 2.08 − 3.28 0.02 0.85 − 4.35 Peptidase inhibitor 15 51050.00 ENSG00000137558 4.70 3.74 3.81 2.77 2.96 3.35
222068_at TMED4 − 1.06 − 2.08 − 2.62 0.04 0.85 − 4.41 Transmembrane p24 trafficking protein 4 222068.00 ENSG00000158604 6.22 6.92 6.84 6.17 5.82 4.81
1719_at DHFR − 1.06 − 2.08 − 2.82 0.03 0.85 − 4.39 Dihydrofolate reductase 1719.00 ENSG00000228716 4.72 5.34 5.88 4.73 4.22 3.81
51203_at NUSAP1 − 1.06 − 2.09 − 2.70 0.03 0.85 − 4.40 Nucleolar and spindle associated protein 1 51203.00 ENSG00000137804 6.15 5.52 5.25 4.53 5.23 3.97
6217_at RPS16 − 1.06 − 2.09 − 2.75 0.03 0.85 − 4.39 Ribosomal protein S16 6217.00 ENSG00000105193 8.53 9.00 9.28 8.50 7.94 7.17
28960_at DCPS − 1.07 − 2.10 − 2.51 0.05 0.85 − 4.42 Decapping enzyme, scavenger 28960.00 ENSG00000110063 5.10 6.58 5.59 4.75 5.06 4.25
9929_at JOSD1 − 1.07 − 2.10 − 2.52 0.04 0.85 − 4.42 Josephin domain containing 1 9929.00 ENSG00000100221 6.81 7.41 7.05 6.93 5.64 5.48
54534_at MRPL50 − 1.07 − 2.10 − 2.90 0.03 0.85 − 4.38 Mitochondrial ribosomal protein L50 54534.00 ENSG00000136897 5.55 6.48 6.67 5.08 5.61 4.80
51706_at CYB5R1 − 1.08 − 2.11 − 2.67 0.04 0.85 − 4.40 Cytochrome b5 reductase 1 51706.00 ENSG00000159348 5.42 5.82 6.36 4.62 5.51 4.24
6615_at SNAI1 − 1.08 − 2.11 − 4.82 0.00 0.85 − 4.27 Snail family transcriptional repressor 1 6615.00 ENSG00000124216 5.55 5.85 5.80 4.36 4.62 4.99
1063_at CENPF − 1.08 − 2.12 − 3.03 0.02 0.85 − 4.37 Centromere protein F 1063.00 ENSG00000117724 7.15 6.27 6.93 5.82 6.15 5.12
5832_at ALDH18A1 − 1.08 − 2.12 − 2.73 0.03 0.85 − 4.40 Aldehyde dehydrogenase 18 family member A1 5832.00 ENSG00000059573 6.94 7.26 7.20 6.51 6.48 5.16
116092_at DNTTIP1 − 1.09 − 2.12 − 2.57 0.04 0.85 − 4.41 Deoxynucleotidyltransferase terminal interacting protein 1 116092.00 ENSG00000101457 5.89 6.68 6.59 5.61 5.82 4.47
6241_at RRM2 − 1.10 − 2.14 − 2.83 0.03 0.85 − 4.39 Ribonucleotide reductase regulatory subunit M2 6241.00 ENSG00000171848 7.05 6.78 5.62 5.47 5.24 5.44
54764_at ZRANB1 − 1.10 − 2.14 − 3.01 0.02 0.85 − 4.37 Zinc finger RANBP2-type containing 1 54764.00 ENSG00000019995 7.41 8.66 7.86 7.18 6.91 6.54
50_at ACO2 − 1.10 − 2.14 − 2.43 0.05 0.85 − 4.43 Aconitase 2 50.00 ENSG00000100412 4.95 6.14 5.36 4.01 5.18 3.97
84546_at SNORD35B − 1.10 − 2.15 − 2.56 0.04 0.85 − 4.41 Small nucleolar RNA, C/D box 35B 84546.00 ENSG00000200530 5.69 5.74 6.57 4.42 5.71 4.55
677845_at SNORA79 − 1.11 − 2.15 − 2.50 0.05 0.85 − 4.42 Small nucleolar RNA, H/ACA box 79 677845.00 ENSG00000221303 4.99 6.70 5.51 4.76 4.70 4.42
54700_at RRN3 − 1.11 − 2.16 − 2.52 0.04 0.85 − 4.42 RRN3 homolog, RNA polymerase I transcription factor 54700.00 ENSG00000085721, ENSG00000278494 5.79 5.48 5.91 5.61 4.19 4.05
56907_at SPIRE1 − 1.11 − 2.17 − 3.21 0.02 0.85 − 4.35 Spire type actin nucleation factor 1 56907.00 ENSG00000134278 6.98 7.96 7.50 6.63 6.63 5.83
1739_at DLG1 − 1.11 − 2.17 − 3.42 0.01 0.85 − 4.34 Discs large MAGUK scaffold protein 1 1739.00 ENSG00000075711 6.80 7.23 7.18 6.51 6.01 5.36
9991_at PTBP3 − 1.12 − 2.17 − 2.96 0.02 0.85 − 4.38 Polypyrimidine tract binding protein 3 9991.00 ENSG00000119314 8.29 9.03 8.69 7.97 7.88 6.81
54512_at EXOSC4 − 1.12 − 2.17 − 2.89 0.03 0.85 − 4.38 Exosome component 4 54512.00 ENSG00000178896 6.25 7.39 6.94 5.57 6.31 5.35
56910_at STARD7 − 1.12 − 2.17 − 2.79 0.03 0.85 − 4.39 StAR related lipid transfer domain containing 7 56910.00 ENSG00000084090 8.17 8.42 9.00 7.59 7.98 6.66
5894_at RAF1 − 1.12 − 2.17 − 2.62 0.04 0.85 − 4.41 Raf-1 proto-oncogene, serine/threonine kinase 5894.00 ENSG00000132155 7.08 7.18 7.55 6.44 6.79 5.22
3099_at HK2 − 1.12 − 2.18 − 2.80 0.03 0.85 − 4.39 Hexokinase 2 3099.00 ENSG00000159399 6.52 7.97 7.18 6.28 6.31 5.72
1017_at CDK2 − 1.13 − 2.18 − 2.60 0.04 0.85 − 4.41 Cyclin dependent kinase 2 1017.00 ENSG00000123374 6.47 7.67 7.78 5.95 6.73 5.86
9388_at LIPG − 1.13 − 2.19 − 2.82 0.03 0.85 − 4.39 Lipase G, endothelial type 9388.00 ENSG00000101670 4.66 6.09 5.53 4.62 4.32 3.94
100128398_at LOC100128398 − 1.14 − 2.20 − 2.82 0.03 0.85 − 4.39 Uncharacterized LOC100128398 100128398.00 ENSG00000176593 4.70 4.73 5.99 4.23 4.13 3.65
8714_at ABCC3 − 1.14 − 2.21 − 2.45 0.05 0.85 − 4.42 ATP binding cassette subfamily C member 3 8714.00 ENSG00000108846 6.34 7.36 7.00 6.03 6.39 4.86
64866_at CDCP1 − 1.15 − 2.22 − 2.46 0.05 0.85 − 4.42 CUB domain containing protein 1 64866.00 ENSG00000163814 7.31 8.23 7.10 7.00 6.62 5.57
2673_at GFPT1 − 1.15 − 2.23 − 2.86 0.03 0.85 − 4.38 Glutamine--fructose-6-phosphate transaminase 1 2673.00 ENSG00000198380 7.65 8.48 7.99 7.48 7.05 6.13
6376_at CX3CL1 − 1.16 − 2.23 − 2.48 0.05 0.85 − 4.42 C-X3-C motif chemokine ligand 1 6376.00 ENSG00000006210 5.36 6.55 6.82 4.74 5.71 4.81
116113_at FOXP4 − 1.16 − 2.24 − 3.51 0.01 0.85 − 4.33 Forkhead box P4 116113.00 ENSG00000137166 5.23 6.44 5.95 4.53 4.84 4.78
203413_at CT83 − 1.16 − 2.24 − 2.49 0.05 0.85 − 4.42 Cancer/testis antigen 83 203413.00 ENSG00000204019 4.95 6.72 5.25 4.50 4.48 4.45
8503_at PIK3R3 − 1.17 − 2.25 − 2.52 0.04 0.85 − 4.42 Phosphoinositide-3-kinase regulatory subunit 3 8503.00 ENSG00000117461, ENSG00000278139 6.13 7.36 5.60 5.48 5.17 4.93
22992_at KDM2A − 1.17 − 2.25 − 2.51 0.04 0.85 − 4.42 Lysine demethylase 2A 22992.00 ENSG00000173120 8.13 8.42 8.27 7.76 7.52 6.03
55707_at NECAP2 − 1.18 − 2.26 − 2.77 0.03 0.85 − 4.39 NECAP endocytosis associated 2 55707.00 ENSG00000157191 5.93 6.96 7.07 5.21 6.14 5.08
55227_at LRRC1 − 1.18 − 2.26 − 2.74 0.03 0.85 − 4.39 Leucine rich repeat containing 1 55227.00 ENSG00000137269 3.60 5.28 4.36 3.44 3.21 3.05
8694_at DGAT1 − 1.19 − 2.28 − 2.63 0.04 0.85 − 4.40 Diacylglycerol O-acyltransferase 1 8694.00 ENSG00000185000 5.46 6.59 7.05 5.26 5.54 4.74
64225_at ATL2 − 1.19 − 2.28 − 3.39 0.01 0.85 − 4.34 Atlastin GTPase 2 64225.00 ENSG00000119787 5.73 6.75 6.41 5.31 5.42 4.61
6301_at SARS − 1.19 − 2.28 − 2.62 0.04 0.85 − 4.41 Seryl-tRNA synthetase 6301.00 ENSG00000031698 6.58 6.90 7.30 6.15 6.30 4.76
6536_at SLC6A9 − 1.19 − 2.28 − 3.92 0.01 0.85 − 4.31 Solute carrier family 6 member 9 6536.00 ENSG00000196517 6.25 6.41 7.04 5.30 5.04 5.79
4494_at MT1F − 1.19 − 2.29 − 2.61 0.04 0.85 − 4.41 Metallothionein 1F 4494.00 ENSG00000198417 7.00 7.65 7.47 6.32 6.97 5.25
54069_at MIS18A − 1.20 − 2.29 − 3.11 0.02 0.85 − 4.36 MIS18 kinetochore protein A 54069.00 ENSG00000159055 6.46 7.26 6.78 6.34 5.50 5.06
139231_at FAM199X − 1.20 − 2.29 − 4.94 0.00 0.85 − 4.26 Family with sequence similarity 199, X-linked 139231.00 ENSG00000123575 6.30 6.70 6.83 5.73 5.35 5.14
81502_at HM13 − 1.20 − 2.30 − 2.64 0.04 0.85 − 4.40 Histocompatibility minor 13 81502.00 ENSG00000101294 6.54 6.81 7.20 6.04 6.24 4.66
81875_at ISG20L2 − 1.20 − 2.30 − 2.49 0.05 0.85 − 4.42 Interferon stimulated exonuclease gene 20 like 2 81875.00 ENSG00000143319 6.63 6.70 7.71 6.03 6.46 4.94
10040_at TOM1L1 − 1.22 − 2.32 − 2.98 0.02 0.85 − 4.37 Target of myb1 like 1 membrane trafficking protein 10040.00 ENSG00000141198 6.21 7.28 5.96 5.74 5.08 4.99
440138_at ALG11 − 1.22 − 2.33 − 2.47 0.05 0.85 − 4.42 ALG11, alpha-1,2-mannosyltransferase 440138.00 ENSG00000253710 6.85 6.96 7.14 6.24 6.43 4.62
57669_at EPB41L5 − 1.22 − 2.33 − 3.05 0.02 0.85 − 4.37 Erythrocyte membrane protein band 4.1 like 5 57669.00 ENSG00000115109 5.94 6.75 6.66 5.73 5.48 4.48
2120_at ETV6 − 1.23 − 2.34 − 2.75 0.03 0.85 − 4.39 ETS variant 6 2120.00 ENSG00000139083 6.38 7.66 7.03 6.26 6.06 5.07
85461_at TANC1 − 1.24 − 2.36 − 2.81 0.03 0.85 − 4.39 Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 85461.00 ENSG00000115183 6.36 7.37 6.29 5.86 5.76 4.69
127544_at RNF19B − 1.24 − 2.36 − 3.13 0.02 0.85 − 4.36 Ring finger protein 19B 127544.00 ENSG00000116514 5.77 6.76 6.27 5.32 5.44 4.33
8351_at HIST1H3D − 1.24 − 2.36 − 2.71 0.03 0.85 − 4.40 Histone cluster 1 H3 family member d 8351.00 ENSG00000197409 6.54 6.61 7.43 6.39 4.83 5.65
2762_at GMDS − 1.25 − 2.38 − 2.97 0.02 0.85 − 4.37 GDP-mannose 4,6-dehydratase 2762.00 ENSG00000112699 5.64 6.19 6.75 5.17 5.43 4.22
55298_at RNF121 − 1.25 − 2.39 − 2.52 0.04 0.85 − 4.42 Ring finger protein 121 55298.00 ENSG00000137522 4.68 5.17 5.44 4.28 4.49 2.76
6809_at STX3 − 1.26 − 2.39 − 3.23 0.02 0.85 − 4.35 Syntaxin 3 6809.00 ENSG00000166900 6.03 6.89 7.18 5.46 5.92 4.94
51514_at DTL − 1.26 − 2.39 − 3.24 0.02 0.85 − 4.35 Denticleless E3 ubiquitin protein ligase homolog 51514.00 ENSG00000143476 6.44 5.08 5.58 4.27 4.83 4.22
1903_at S1PR3 − 1.26 − 2.40 − 3.11 0.02 0.85 − 4.36 Sphingosine-1-phosphate receptor 3 1903.00 ENSG00000213694 5.47 5.96 6.54 5.20 4.95 4.04
100288069_at LOC100288069 − 1.27 − 2.40 − 3.58 0.01 0.85 − 4.33 Uncharacterized LOC100288069 100288069.00 NA 5.03 5.98 5.56 4.54 3.69 4.55
221079_at ARL5B − 1.27 − 2.41 − 2.86 0.03 0.85 − 4.38 ADP ribosylation factor like GTPase 5B 221079.00 ENSG00000165997 6.61 8.07 7.89 6.46 6.53 5.78
72_at ACTG2 − 1.27 − 2.41 − 3.35 0.01 0.85 − 4.35 Actin, gamma 2, smooth muscle, enteric 72.00 ENSG00000163017 3.76 4.44 3.10 2.36 2.87 2.25
23636_at NUP62 − 1.27 − 2.41 − 2.97 0.02 0.85 − 4.37 Nucleoporin 62 23636.00 ENSG00000213024 5.99 6.14 7.01 5.40 5.58 4.35
57154_at SMURF1 − 1.28 − 2.43 − 2.97 0.02 0.85 − 4.37 SMAD specific E3 ubiquitin protein ligase 1 57154.00 ENSG00000198742, ENSG00000284126 5.85 6.76 5.71 5.32 5.08 4.08
9055_at PRC1 − 1.28 − 2.43 − 4.05 0.01 0.85 − 4.30 Protein regulator of cytokinesis 1 9055.00 ENSG00000198901 7.49 7.99 7.11 6.27 6.64 5.83
201475_at RAB12 − 1.28 − 2.43 − 2.88 0.03 0.85 − 4.38 RAB12, member RAS oncogene family 201475.00 ENSG00000206418 7.79 8.27 7.74 6.98 7.29 5.68
11123_at RCAN3 − 1.30 − 2.46 − 2.97 0.02 0.85 − 4.37 RCAN family member 3 11123.00 ENSG00000117602 5.67 7.23 6.70 5.67 5.10 4.94
10276_at NET1 − 1.30 − 2.46 − 3.19 0.02 0.85 − 4.36 Neuroepithelial cell transforming 1 10276.00 ENSG00000173848 6.53 7.72 6.78 5.85 6.14 5.14
79065_at ATG9A − 1.30 − 2.47 − 3.05 0.02 0.85 − 4.37 Autophagy related 9A 79065.00 ENSG00000198925 6.34 7.11 7.46 5.94 6.12 4.93
890_at CCNA2 − 1.31 − 2.47 − 2.50 0.05 0.85 − 4.42 cyclin A2 890.00 ENSG00000145386 6.91 6.72 5.52 5.40 5.63 4.20
100506658_at OCLN − 1.31 − 2.48 − 3.25 0.02 0.85 − 4.35 occludin 100506658.00 ENSG00000197822, ENSG00000273814 3.76 5.05 5.21 3.44 3.42 3.24
5209_at PFKFB3 − 1.31 − 2.49 − 2.46 0.05 0.85 − 4.42 6-Phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 5209.00 ENSG00000170525 4.95 5.48 6.21 4.44 5.01 3.25
51361_at HOOK1 − 1.31 − 2.49 − 2.65 0.04 0.85 − 4.40 Hook microtubule tethering protein 1 51361.00 ENSG00000134709 3.25 4.78 5.06 2.77 3.04 3.34
701_at BUB1B − 1.32 − 2.50 − 5.79 0.00 0.85 − 4.24 BUB1 mitotic checkpoint serine/threonine kinase B 701.00 ENSG00000156970 6.46 6.40 5.91 5.01 4.70 5.10
85406_at DNAJC14 − 1.33 − 2.52 − 3.14 0.02 0.85 − 4.36 DnaJ heat shock protein family (Hsp40) member C14 85406.00 ENSG00000135392 5.91 6.24 6.27 5.19 5.38 3.85
6907_at TBL1X − 1.34 − 2.53 − 3.73 0.01 0.85 − 4.32 Transducin beta like 1 X-linked 6907.00 ENSG00000101849 4.83 5.79 4.97 4.30 3.90 3.38
3728_at JUP − 1.35 − 2.54 − 2.69 0.04 0.85 − 4.40 Junction plakoglobin 3728.00 ENSG00000173801 5.39 7.24 6.88 4.82 5.41 5.25
7153_at TOP2A − 1.35 − 2.55 − 2.47 0.05 0.85 − 4.42 DNA topoisomerase II alpha 7153.00 ENSG00000131747 8.13 6.98 7.44 6.45 6.96 5.08
56888_at KCMF1 − 1.35 − 2.56 − 2.57 0.04 0.85 − 4.41 Potassium channel modulatory factor 1 56888.00 ENSG00000176407 7.45 8.10 8.39 7.40 6.94 5.54
112616_at CMTM7 − 1.35 − 2.56 − 2.58 0.04 0.85 − 4.41 CKLF like MARVEL transmembrane domain containing 7 112616.00 ENSG00000153551 5.31 7.09 6.28 4.46 5.58 4.57
4318_at MMP9 − 1.36 − 2.57 − 2.86 0.03 0.85 − 4.38 Matrix metallopeptidase 9 4318.00 ENSG00000100985 5.69 6.61 7.44 5.56 5.32 4.77
57535_at KIAA1324 − 1.36 − 2.57 − 3.51 0.01 0.85 − 4.33 KIAA1324 57535.00 ENSG00000116299 5.17 6.65 5.85 4.34 4.75 4.49
57162_at PELI1 − 1.38 − 2.60 − 2.82 0.03 0.85 − 4.39 Pellino E3 ubiquitin protein ligase 1 57162.00 ENSG00000197329 5.32 7.19 6.58 5.08 5.22 4.64
9654_at TTLL4 − 1.38 − 2.60 − 2.48 0.05 0.85 − 4.42 Tubulin tyrosine ligase like 4 9654.00 ENSG00000135912 6.28 7.67 8.29 6.19 6.45 5.46
493856_at CISD2 − 1.39 − 2.61 − 4.51 0.00 0.85 − 4.28 CDGSH iron sulfur domain 2 493856.00 ENSG00000145354 6.53 7.52 7.37 6.00 5.65 5.61
1857_at DVL3 − 1.39 − 2.62 − 2.90 0.03 0.85 − 4.38 Dishevelled segment polarity protein 3 1857.00 ENSG00000161202 7.03 8.07 7.79 6.77 6.66 5.30
102723739_at LOC102723739 − 1.39 − 2.63 − 2.66 0.04 0.85 − 4.40 Uncharacterized LOC102723739 102723739.00 NA 3.14 4.09 5.29 2.79 2.80 2.75
91452_at ACBD5 − 1.40 − 2.63 − 2.44 0.05 0.85 − 4.42 Acyl-CoA binding domain containing 5 91452.00 ENSG00000107897 5.59 7.02 5.87 5.24 5.35 3.71
79622_at SNRNP25 − 1.41 − 2.66 − 3.19 0.02 0.85 − 4.36 Small nuclear ribonucleoprotein U11/U12 subunit 25 79622.00 ENSG00000161981 5.44 6.73 6.20 4.54 5.39 4.20
200634_at KRTCAP3 − 1.41 − 2.66 − 2.79 0.03 0.85 − 4.39 Keratinocyte associated protein 3 200634.00 ENSG00000157992 5.96 7.90 6.93 5.59 5.84 5.12
6533_at SLC6A6 − 1.41 − 2.66 − 2.61 0.04 0.85 − 4.41 Solute carrier family 6 member 6 6533.00 ENSG00000131389 6.44 7.15 8.29 5.87 6.50 5.28
3419_at IDH3A − 1.41 − 2.67 − 2.56 0.04 0.85 − 4.41 Isocitrate dehydrogenase 3 (NAD(+)) alpha 3419.00 ENSG00000166411 6.50 7.78 6.68 6.24 5.95 4.54
85236_at HIST1H2BK − 1.42 − 2.67 − 2.84 0.03 0.85 − 4.39 Histone cluster 1 H2B family member k 85236.00 ENSG00000197903 8.26 7.61 8.77 7.17 7.39 5.83
4133_at MAP2 − 1.42 − 2.68 − 2.67 0.04 0.85 − 4.40 Microtubule associated protein 2 4133.00 ENSG00000078018 5.20 7.30 5.83 4.86 4.76 4.45
10809_at STARD10 − 1.42 − 2.68 − 2.82 0.03 0.85 − 4.39 StAR related lipid transfer domain containing 10 10809.00 ENSG00000214530 5.74 7.20 6.04 4.20 4.94 5.57
440278_at CATSPER2P1 − 1.43 − 2.70 − 3.43 0.01 0.85 − 4.34 Cation channel sperm associated 2 pseudogene 1 440278.00 ENSG00000205771 4.41 5.58 4.78 4.17 3.16 3.15
8985_at PLOD3 − 1.46 − 2.74 − 3.09 0.02 0.85 − 4.36 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 8985.00 ENSG00000106397 7.17 8.09 8.06 6.92 6.63 5.41
7978_at MTERF1 − 1.46 − 2.74 − 3.13 0.02 0.85 − 4.36 Mitochondrial transcription termination factor 1 7978.00 ENSG00000127989 5.75 5.78 5.99 4.98 3.31 4.87
146223_at CMTM4 − 1.47 − 2.78 − 4.22 0.01 0.85 − 4.29 CKLF like MARVEL transmembrane domain containing 4 146223.00 ENSG00000183723 6.79 7.29 6.90 5.74 6.00 4.82
64426_at SUDS3 − 1.48 − 2.78 − 3.91 0.01 0.85 − 4.31 SDS3 homolog, SIN3A corepressor complex component 64426.00 ENSG00000111707 5.36 5.85 6.04 4.52 4.77 3.53
57530_at CGN − 1.48 − 2.79 − 2.47 0.05 0.85 − 4.42 Cingulin 57530.00 ENSG00000143375 3.80 5.94 5.36 2.96 4.09 3.61
6271_at S100A1 − 1.48 − 2.79 − 2.43 0.05 0.85 − 4.42 S100 calcium binding protein A1 6271.00 ENSG00000160678 4.99 7.06 7.09 4.48 4.99 5.24
375035_at SFT2D2 − 1.49 − 2.81 − 2.72 0.03 0.85 − 4.40 SFT2 domain containing 2 375035.00 ENSG00000213064 8.02 8.63 9.94 7.04 8.03 7.05
158586_at ZXDB − 1.50 − 2.82 − 2.98 0.02 0.85 − 4.37 Zinc finger, X-linked, duplicated B 158586.00 ENSG00000198455 6.61 7.35 6.90 6.50 5.24 4.62
9368_at SLC9A3R1 − 1.50 − 2.82 − 3.06 0.02 0.85 − 4.37 SLC9A3 regulator 1 9368.00 ENSG00000109062 6.51 8.26 7.59 5.91 6.44 5.52
6398_at SECTM1 − 1.50 − 2.83 − 2.51 0.04 0.85 − 4.42 Secreted and transmembrane 1 6398.00 ENSG00000141574 5.80 6.88 8.25 5.56 5.25 5.61
1717_at DHCR7 − 1.51 − 2.84 − 2.91 0.03 0.85 − 4.38 7-Dehydrocholesterol reductase 1717.00 ENSG00000172893 6.16 8.01 7.10 6.15 5.50 5.10
7097_at TLR2 − 1.51 − 2.84 − 3.05 0.02 0.85 − 4.37 Toll like receptor 2 7097.00 ENSG00000137462 5.32 6.65 6.31 3.74 5.13 4.89
94039_at ZNF101 − 1.53 − 2.90 − 2.44 0.05 0.85 − 4.42 Zinc finger protein 101 94039.00 ENSG00000181896 4.28 6.82 5.07 3.94 3.99 3.64
22974_at TPX2 − 1.54 − 2.91 − 3.85 0.01 0.85 − 4.31 TPX2, microtubule nucleation factor 22974.00 ENSG00000088325 6.77 6.86 6.44 5.59 5.59 4.27
1838_at DTNB − 1.55 − 2.92 − 3.70 0.01 0.85 − 4.32 Dystrobrevin beta 1838.00 ENSG00000138101 4.93 5.76 6.59 4.31 4.17 4.17
51176_at LEF1 − 1.55 − 2.92 − 3.59 0.01 0.85 − 4.33 Lymphoid enhancer binding factor 1 51176.00 ENSG00000138795 4.60 4.50 5.54 4.01 2.71 3.28
10207_at PATJ − 1.55 − 2.94 − 3.54 0.01 0.85 − 4.33 PATJ, crumbs cell polarity complex component 10207.00 ENSG00000132849 5.44 7.03 6.29 5.14 4.59 4.38
29028_at ATAD2 − 1.56 − 2.95 − 3.11 0.02 0.85 − 4.36 ATPase family, AAA domain containing 2 29028.00 ENSG00000156802 6.59 6.84 6.37 5.91 5.26 3.94
4301_at AFDN − 1.58 − 2.99 − 3.08 0.02 0.85 − 4.37 Afadin, adherens junction formation factor 4301.00 ENSG00000130396 7.28 8.54 7.96 6.92 6.74 5.38
3838_at KPNA2 − 1.58 − 2.99 − 2.62 0.04 0.85 − 4.41 Karyopherin subunit alpha 2 3838.00 ENSG00000182481 7.53 7.88 7.85 7.19 6.54 4.78
79837_at PIP4K2C − 1.58 − 2.99 − 2.43 0.05 0.85 − 4.42 Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma 79837.00 ENSG00000166908 5.02 7.63 6.73 4.54 5.18 4.91
3691_at ITGB4 − 1.59 − 3.01 − 3.59 0.01 0.85 − 4.33 Integrin subunit beta 4 3691.00 ENSG00000132470 4.89 6.44 6.02 3.86 4.64 4.08
8342_at HIST1H2BM − 1.59 − 3.02 − 7.74 0.00 0.85 − 4.21 Histone cluster 1 H2B family member m 8342.00 ENSG00000273703 6.08 6.15 6.49 4.88 4.55 4.50
1317_at SLC31A1 − 1.60 − 3.03 − 2.62 0.04 0.85 − 4.41 Solute carrier family 31 member 1 1317.00 ENSG00000136868 7.61 8.97 8.40 7.02 7.62 5.54
360019_at KRT18P10 − 1.61 − 3.05 − 3.19 0.02 0.85 − 4.36 Keratin 18 pseudogene 10 360019.00 NA 3.49 5.09 3.33 2.02 2.32 2.73
388564_at TMEM238 − 1.62 − 3.07 − 2.91 0.03 0.85 − 4.38 Transmembrane protein 238 388564.00 ENSG00000233493 5.09 6.52 7.12 5.18 4.36 4.34
4316_at MMP7 − 1.62 − 3.07 − 2.79 0.03 0.85 − 4.39 Matrix metallopeptidase 7 4316.00 ENSG00000137673 6.90 8.39 6.73 6.19 6.15 4.82
27350_at APOBEC3C − 1.62 − 3.08 − 3.59 0.01 0.85 − 4.33 Apolipoprotein B mRNA editing enzyme catalytic subunit 3C 27350.00 ENSG00000244509 6.78 6.83 7.46 6.07 5.66 4.47
26578_at OSTF1 − 1.62 − 3.08 − 2.59 0.04 0.85 − 4.41 Osteoclast stimulating factor 1 26578.00 ENSG00000134996 6.81 7.32 7.15 6.36 6.06 4.00
8424_at BBOX1 − 1.62 − 3.08 − 2.43 0.05 0.85 − 4.43 Gamma-Butyrobetaine hydroxylase 1 8424.00 ENSG00000129151 3.19 4.73 5.98 2.95 3.10 2.97
56990_at CDC42SE2 − 1.63 − 3.10 − 2.83 0.03 0.85 − 4.39 CDC42 small effector 2 56990.00 ENSG00000158985 6.36 6.43 6.68 5.77 5.28 3.52
27095_at TRAPPC3 − 1.64 − 3.11 − 2.68 0.04 0.85 − 4.40 Trafficking protein particle complex 3 27095.00 ENSG00000054116 7.43 8.62 9.34 7.39 7.21 5.87
1672_at DEFB1 − 1.64 − 3.12 − 2.76 0.03 0.85 − 4.39 Defensin beta 1 1672.00 ENSG00000164825 6.43 8.53 7.29 5.20 6.46 5.67
7045_at TGFBI − 1.65 − 3.13 − 2.51 0.04 0.85 − 4.42 Transforming growth factor beta induced 7045.00 ENSG00000120708 8.86 7.38 7.93 6.92 7.22 5.10
105374310_at LOC105374310 − 1.65 − 3.15 − 3.11 0.02 0.85 − 4.36 Uncharacterized LOC105374310 105374310.00 NA 4.90 6.39 6.91 4.27 4.80 4.16
1836_at SLC26A2 − 1.67 − 3.17 − 2.90 0.03 0.85 − 4.38 Solute carrier family 26 member 2 1836.00 ENSG00000155850 6.09 7.64 6.78 5.93 5.41 4.17
196_at AHR − 1.68 − 3.21 − 3.62 0.01 0.85 − 4.33 Aryl hydrocarbon receptor 196.00 ENSG00000106546 8.48 9.96 8.80 7.66 7.75 6.77
4233_at MET − 1.70 − 3.24 − 2.82 0.03 0.85 − 4.39 MET proto-oncogene, receptor tyrosine kinase 4233.00 ENSG00000105976 6.25 6.90 5.63 5.72 4.39 3.58
10652_at YKT6 − 1.70 − 3.24 − 3.35 0.01 0.85 − 4.34 YKT6 v-SNARE homolog 10652.00 ENSG00000106636 6.29 7.03 7.09 5.77 5.51 4.03
5768_at QSOX1 − 1.70 − 3.25 − 2.53 0.04 0.85 − 4.41 Quiescin sulfhydryl oxidase 1 5768.00 ENSG00000116260 5.27 7.66 7.06 5.27 5.40 4.22
93474_at ZNF670 − 1.72 − 3.30 − 5.97 0.00 0.85 − 4.24 Zinc finger protein 670 93474.00 ENSG00000277462 4.16 4.70 4.86 3.29 2.65 2.61
7020_at TFAP2A − 1.74 − 3.34 − 2.58 0.04 0.85 − 4.41 Transcription factor AP-2 alpha 7020.00 ENSG00000137203 5.64 6.83 8.41 5.11 5.46 5.09
11221_at DUSP10 − 1.74 − 3.34 − 3.52 0.01 0.85 − 4.33 Dual specificity phosphatase 10 11221.00 ENSG00000143507 7.27 7.36 8.15 6.18 6.53 4.85
56900_at TMEM167B − 1.75 − 3.36 − 2.51 0.04 0.85 − 4.42 Transmembrane protein 167B 56900.00 ENSG00000215717 6.05 7.34 7.33 5.78 5.98 3.71
5557_at PRIM1 − 1.77 − 3.42 − 3.72 0.01 0.85 − 4.32 DNA primase subunit 1 5557.00 ENSG00000198056 5.69 6.34 5.89 5.24 3.85 3.52
5795_at PTPRJ − 1.78 − 3.45 − 2.69 0.04 0.85 − 4.40 Protein tyrosine phosphatase, receptor type J 5795.00 ENSG00000149177 5.39 8.03 6.45 4.69 5.31 4.51
79022_at TMEM106C − 1.79 − 3.46 − 2.53 0.04 0.85 − 4.41 Transmembrane protein 106C 79022.00 ENSG00000134291 5.41 7.66 6.77 5.50 5.25 3.73
481_at ATP1B1 − 1.80 − 3.47 − 2.47 0.05 0.85 − 4.42 ATPase Na+/K+ transporting subunit beta 1 481.00 ENSG00000143153 7.64 10.31 8.18 6.69 7.58 6.48
105376171_at LOC105376171 − 1.81 − 3.51 − 3.93 0.01 0.85 − 4.31 Uncharacterized LOC105376171 105376171.00 ENSG00000231521 5.55 6.06 6.77 5.09 4.15 3.71
283987_at HID1 − 1.84 − 3.59 − 3.15 0.02 0.85 − 4.36 HID1 domain containing 283987.00 ENSG00000167861 5.14 7.50 6.41 4.34 4.84 4.34
1942_at EFNA1 − 1.85 − 3.59 − 3.36 0.01 0.85 − 4.34 Ephrin A1 1942.00 ENSG00000169242 3.73 5.03 5.96 2.89 3.02 3.27
84844_at PHF5A − 1.85 − 3.60 − 2.79 0.03 0.85 − 4.39 PHD finger protein 5A 84844.00 ENSG00000100410 4.91 6.55 7.50 4.70 3.97 4.75
10653_at SPINT2 − 1.86 − 3.63 − 2.56 0.04 0.85 − 4.41 Serine peptidase inhibitor, Kunitz type 2 10653.00 ENSG00000167642 5.07 7.84 6.95 4.08 5.09 5.10
100313770_at MIR548K − 1.87 − 3.66 − 2.88 0.03 0.85 − 4.38 MicroRNA 548k 100313770.00 ENSG00000221333 3.67 4.79 6.36 3.00 3.16 3.05
83481_at EPPK1 − 1.90 − 3.73 − 2.96 0.02 0.85 − 4.38 Epiplakin 1 83481.00 ENSG00000261150 3.92 5.27 6.60 3.38 3.37 3.34
55971_at BAIAP2L1 − 1.90 − 3.74 − 2.68 0.04 0.85 − 4.40 BAI1 associated protein 2 like 1 55971.00 ENSG00000006453 5.12 7.77 6.23 4.14 5.25 4.03
3675_at ITGA3 − 1.91 − 3.75 − 2.69 0.03 0.85 − 4.40 Integrin subunit alpha 3 3675.00 ENSG00000005884 6.84 7.81 7.05 6.01 6.25 3.72
1545_at CYP1B1 − 1.95 − 3.86 − 2.71 0.03 0.85 − 4.40 Cytochrome P450 family 1 subfamily B member 1 1545.00 ENSG00000138061 7.76 8.41 9.92 7.13 7.54 5.58
57153_at SLC44A2 − 1.96 − 3.88 − 2.62 0.04 0.85 − 4.41 Solute carrier family 44 member 2 57153.00 ENSG00000129353 6.65 8.62 8.63 6.29 6.93 4.82
11009_at IL24 − 1.96 − 3.90 − 2.95 0.02 0.85 − 4.38 Interleukin 24 11009.00 ENSG00000162892 6.61 7.42 7.13 4.36 6.63 4.28
6272_at SORT1 − 1.99 − 3.97 − 2.78 0.03 0.85 − 4.39 Sortilin 1 6272.00 ENSG00000134243 5.51 7.42 7.93 5.07 5.70 4.12
6692_at SPINT1 − 2.00 − 4.01 − 3.35 0.01 0.85 − 4.35 Serine peptidase inhibitor, Kunitz type 1 6692.00 ENSG00000166145 5.61 8.07 6.52 4.84 4.67 4.68
129642_at MBOAT2 − 2.01 − 4.03 − 3.80 0.01 0.85 − 4.32 Membrane bound O-acyltransferase domain containing 2 129642.00 ENSG00000143797 6.45 7.14 6.80 5.33 5.43 3.59
1829_at DSG2 − 2.01 − 4.04 − 3.59 0.01 0.85 − 4.33 Desmoglein 2 1829.00 ENSG00000046604 6.13 8.00 6.21 4.67 5.29 4.34
92421_at CHMP4C − 2.07 − 4.19 − 2.76 0.03 0.85 − 4.39 Charged multivesicular body protein 4C 92421.00 ENSG00000164695 4.82 7.95 6.36 4.17 4.22 4.54
219970_at GLYATL2 − 2.07 − 4.19 − 5.74 0.00 0.85 − 4.24 Glycine-N-acyltransferase like 2 219970.00 ENSG00000156689 6.74 6.55 6.57 5.30 4.44 3.92
1366_at CLDN7 − 2.10 − 4.30 − 3.20 0.02 0.85 − 4.36 Claudin 7 1366.00 ENSG00000181885 5.76 8.28 7.54 4.96 5.60 4.71
55041_at PLEKHB2 − 2.12 − 4.34 − 2.52 0.04 0.85 − 4.42 Pleckstrin homology domain containing B2 55041.00 ENSG00000115762 5.98 7.53 7.36 5.85 5.63 3.04
337875_at HIST2H2BA − 2.16 − 4.47 − 3.17 0.02 0.85 − 4.36 Histone cluster 2 H2B family member a (pseudogene) 337875.00 NA 5.74 6.89 7.36 5.17 5.17 3.17
6768_at ST14 − 2.18 − 4.53 − 2.65 0.04 0.85 − 4.40 Suppression of tumorigenicity 14 6768.00 ENSG00000149418 4.10 7.39 6.61 3.59 4.00 3.98
8140_at SLC7A5 − 2.20 − 4.58 − 2.99 0.02 0.85 − 4.37 Solute carrier family 7 member 5 8140.00 ENSG00000103257 6.75 9.18 8.08 5.84 6.74 4.84
1824_at DSC2 − 2.20 − 4.61 − 3.51 0.01 0.85 − 4.33 Desmocollin 2 1824.00 ENSG00000134755 7.20 9.00 8.68 6.43 6.77 5.07
200058_at FLJ23867 − 2.20 − 4.61 − 3.11 0.02 0.85 − 4.36 Uncharacterized protein FLJ23867 200058.00 NA 6.24 9.21 8.00 5.63 5.62 5.59
51330_at TNFRSF12A − 2.28 − 4.86 − 2.71 0.03 0.85 − 4.40 TNF receptor superfamily member 12A 51330.00 ENSG00000006327 6.98 8.53 10.21 5.90 7.16 5.82
2517_at FUCA1 − 2.31 − 4.97 − 2.64 0.04 0.85 − 4.40 alpha-L-Fucosidase 1 2517.00 ENSG00000179163 5.26 7.76 8.62 5.33 5.19 4.17
1832_at DSP − 2.34 − 5.06 − 6.25 0.00 0.85 − 4.23 Desmoplakin 1832.00 ENSG00000096696 7.04 8.21 8.17 5.74 5.56 5.11
1500_at CTNND1 − 2.38 − 5.22 − 2.78 0.03 0.85 − 4.39 Catenin delta 1 1500.00 ENSG00000198561 6.60 9.08 8.82 5.74 7.01 4.60
55959_at SULF2 − 2.39 − 5.24 − 3.21 0.02 0.85 − 4.36 Sulfatase 2 55959.00 ENSG00000196562 6.43 8.46 6.99 4.71 6.15 3.84
102723517_at LOC102723517 − 2.42 − 5.34 − 2.87 0.03 0.85 − 4.38 Uncharacterized LOC102723517 102723517.00 ENSG00000234899 7.56 9.83 10.72 6.94 7.68 6.25
79679_at VTCN1 − 2.42 − 5.36 − 2.75 0.03 0.85 − 4.39 V-set domain containing T-cell activation inhibitor 1 79679.00 ENSG00000134258 4.11 6.81 7.68 3.76 3.66 3.92
50848_at F11R − 2.45 − 5.45 − 2.56 0.04 0.85 − 4.41 F11 receptor 50848.00 ENSG00000158769 5.11 8.90 7.36 4.60 5.42 4.00
4071_at TM4SF1 − 2.46 − 5.50 − 2.70 0.03 0.85 − 4.40 Transmembrane 4 L six family member 1 4071.00 ENSG00000169908 5.87 9.24 7.98 5.71 5.82 4.19
999_at CDH1 − 2.46 − 5.50 − 3.13 0.02 0.85 − 4.36 Cadherin 1 999.00 ENSG00000039068 6.21 9.33 6.90 4.97 5.32 4.78
2568_at GABRP − 2.51 − 5.70 − 2.92 0.03 0.85 − 4.38 gamma-Aminobutyric acid type A receptor pi subunit 2568.00 ENSG00000094755 5.83 8.82 8.48 4.59 6.09 4.90
54845_at ESRP1 − 2.56 − 5.91 − 2.58 0.04 0.85 − 4.41 Epithelial splicing regulatory protein 1 54845.00 ENSG00000104413 3.97 8.06 6.65 3.27 4.06 3.66
3655_at ITGA6 − 2.58 − 5.97 − 2.73 0.03 0.85 − 4.40 Integrin subunit alpha 6 3655.00 ENSG00000091409 5.87 9.56 8.76 4.93 5.84 5.69
3854_at KRT6B − 2.61 − 6.11 − 2.62 0.04 0.85 − 4.41 Keratin 6B 3854.00 ENSG00000185479 9.02 9.60 9.42 8.23 7.64 4.34
3694_at ITGB6 − 2.63 − 6.18 − 5.73 0.00 0.85 − 4.24 Integrin subunit beta 6 3694.00 ENSG00000115221 7.21 8.24 7.04 4.28 5.59 4.73
27075_at TSPAN13 − 2.75 − 6.73 − 2.70 0.03 0.85 − 4.40 Tetraspanin 13 27075.00 ENSG00000106537 5.26 9.38 8.10 4.39 4.75 5.35
654319_at SNORA5A − 2.76 − 6.79 − 3.19 0.02 0.85 − 4.36 Small nucleolar RNA, H/ACA box 5A 654319.00 ENSG00000206838 3.56 6.90 6.28 3.32 2.69 2.45
8842_at PROM1 − 2.76 − 6.79 − 2.56 0.04 0.85 − 4.41 Prominin 1 8842.00 ENSG00000007062 5.98 9.88 7.29 4.82 6.17 3.86
102723505_at LINC02095 − 2.86 − 7.25 − 2.67 0.04 0.85 − 4.40 Long intergenic non-protein coding RNA 2095 102723505.00 ENSG00000228639 5.17 8.97 8.94 4.90 5.43 4.17
114569_at MAL2 − 3.05 − 8.28 − 3.35 0.01 0.85 − 4.34 mal, T-cell differentiation protein 2 (gene/pseudogene) 114569.00 ENSG00000147676 7.95 10.23 9.52 6.32 7.65 4.58
938_at CD24P4 − 3.29 − 9.81 − 3.13 0.02 0.85 − 4.36 CD24 molecule pseudogene 4 938.00 NA 6.48 7.89 7.12 3.49 6.16 1.96
105376425_at LOC105376425 − 3.46 -11.03 − 3.40 0.01 0.85 − 4.34 Uncharacterized LOC105376425 105376425.00 NA 6.44 9.61 6.90 5.20 4.68 2.68
8364_at HIST1H4C − 3.63 -12.39 − 3.25 0.02 0.85 − 4.35 Histone cluster 1 H4 family member c 8364.00 ENSG00000197061 6.78 5.03 9.38 4.50 2.75 3.05
260436_at FDCSP − 4.42 -21.46 − 2.81 0.03 0.85 − 4.39 Follicular dendritic cell secreted protein 260436.00 ENSG00000181617 8.08 11.32 11.19 4.13 9.03 4.16
6279_at S100A8 − 4.79 -27.66 − 3.93 0.01 0.85 − ρ4.31 S100 calcium binding protein A8 6279.00 ENSG00000143546 5.66 9.82 10.42 3.96 3.56 4.01
  1. BT133, BT134 and BT138 corresponds to three different TNBC patients