From: Comparing 16S rDNA amplicon sequencing and hybridization capture for pea aphid microbiota diversity analysis
Method
Raw reads
Reads after QC
Reads after chimera removal
Proportion of rRNA reads (%)
EM primers [9]
3086
3010
3000
100.00
NAR primers [10]
39,551
37,417
37,362
SHS capture
18,113
12,930
68.61