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Table 2 Genetic diversity in 317 AFLP loci in 32 USDA accessions of Chamaecrista fasciculata

From: Genetic diversity of Chamaecrista fasciculata (Fabaceae) from the USDA germplasm collection

  N Na Ne I H Uh %P
Pop
 Central US
  Mean 5.000 1.297 1.402 0.355 0.239 0.298 62.71
  SE 0.000 0.086 0.033 0.026 0.018 0.022  
 South (US)
  Mean 6.000 0.932 1.236 0.209 0.140 0.168 38.14
  SE 0.000 0.084 0.031 0.025 0.017 0.021  
 AR/MS
  Mean 3.000 0.466 1.081 0.065 0.045 0.068 10.17
  SE 0.000 0.062 0.022 0.018 0.012 0.019  
 Texas
  Mean 11.000 1.263 1.264 0.267 0.169 0.186 59.32
  SE 0.000 0.085 0.028 0.023 0.016 0.017  
 Admixed
  Mean 7.000 1.246 1.332 0.306 0.201 0.235 58.47
  SE 0.000 0.086 0.032 0.025 0.017 0.020  
Grand mean and SE over loci and pops
 Total
  Mean 6.400 1.041 1.263 0.240 0.159 0.191 45.76
  SE 0.109 0.038 0.014 0.011 0.008 0.009 9.89
  1. Na = no. of different alleles, Ne = no. of effective alleles = 1/(p^2 + q^2), I = Shannon’s Information Index = −1* (p * Ln (p) + q * Ln(q)), H = diversity = 1 − (p^2 + q^2), uh = unbiased diversity = (N/(N−1)) * h (where for haploid binary data, p = Band Freq. and q = 1 − p), and  %P = percent polymorphic loci