Table 2 Pathways affected by the identified SNPs and their associated statistical scores
From: Whole genome analysis of Black Bengal goat from Savar Goat Farm, Bangladesh
Annotation cluster 1 | Enrichment score: 3.16 | Count | p value | Benjamini |
|---|---|---|---|---|
KEGG_PATHWAY | Fatty acid degradation | 17 | 3.40E−06 | 1.80E−04 |
KEGG_PATHWAY | Fatty acid metabolism | 15 | 1.00E−03 | 9.70E−03 |
KEGG_PATHWAY | PPAR signalling pathway | 13 | 9.20E−02 | 3.40E−01 |
Annotation cluster 2 | Enrichment score: 2.8 | Count | p-value | Benjamini |
|---|---|---|---|---|
KEGG_PATHWAY | Protein digestion and absorption | 36 | 2.90E−08 | 3.80E−06 |
KEGG_PATHWAY | ECM-receptor interaction | 22 | 5.20E−04 | 5.50E−03 |
KEGG_PATHWAY | Focal adhesion | 34 | 2.30E−02 | 1.20E−01 |
KEGG_PATHWAY | Amoebiasis | 20 | 3.10E−02 | 1.50E−01 |
KEGG_PATHWAY | PI3K-Akt signaling pathway | 32 | 9.40E−01 | 9.90E−01 |