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Table 1 Characteristics of the 15 microsatellite markers developed for Thuja standishii

From: Development of microsatellite markers for the Japanese endemic conifer Thuja standishii and transfer to other East Asian species

Locus

Primer (5′-3′)

Repeat motif

Allele size range (bp)

BlastX top hit description

E-value

Genbank accession

Kurobe_18480

F: TCAGGACCCCAACAAATAAA

R: GATGCTGGAGATGGTATTTCG

(AT)9

135–189

Unknown [Picea sitchensis] ABR17033.1

3E−95

MN170833

Kurobe_2969

F: ACACAATCTTGCCCAGAAGC

R: ACACAATCTTGCCCAGAAGC

(TA)8

269–291

WRI2 [Larix gmelinii var. olgensis x L. kaempferi] AJP75043.1

0

MN170828

Kurobe_23700

F: CCGACGCCTCTACATTCATT

R: ATGGAAAAGAGGCAGAGCAA

(TCT)10

250–268

Hypothetical protein MARPO_0043s0052 [Marchantia polymorpha] PTQ39804.1

2E−39

MN170835

Kurobe_44557

F: GATCCCTTTTGATGGGTTCA

R: TTATCCCCAACTTCAGCGAG

(TC)11

313–349

MN170841

Kurobe_15129

F: TTAACATCCACCAATGGCAA

R: CAAATGCATGGAATGTGGTC

(TC)12

205–233

Unknown [Picea sitchensis] ABK22564.1

9E−66

MN170831

Kurobe_16758

F: TGCAACGTCATAACCACGAT

R: CACCCTTCTAGAGCTGGTCG

(CT)8

272–283

CYP866B7 [Taxus chinensis] ATG30002.1

0

MN170832

Kurobe_6943

F: CTACGTCTTAGCCTCCACGC

R: ATGCCATACTGGGGTCTGAG

(CT)11

159–169

Early nodulin-like protein 2 [Amborella trichopoda] XP_011628802.2

4E−37

MN170830

Kurobe_23263

F: CCAGGCCCTAATTTCCACTC

R: CCATGGCACATGGATACAGA

(AG)10

290–314

MN170834

Kurobe_51603

F: CAAAGCAACAGAGCCAACAA

R: AAATAGGGTGCTGCAGGTTG

(TG)13

162–201

MN170842

Kurobe_31302

F: TCCCAAGTCTGGGGCAGT

R: GTCACAGTCGGGAGCAATTT

(GT)8

264–274

MN170836

Kurobe_38308

F: TTTGCTGAAACCCAGGAATC

R: CCCCATATGGAAGAAGATCC

(TG)11

272–297

MN170837

Kurobe_41636

F: TTGAACTTTGCAGTGGGAAA

R: GAACCAGACAGGAATCGGAA

(CA)8

157–165

MN170839

Kurobe_42400

F: TTCACACAAGGGCCTACTCC

R: GCCGACAGGTCTCTTAGCAC

(TC)9

254–272

MN170840

Kurobe_40825

F: TTATCCCATGAGCGTGCTTT

R: TAGGTGCGGTGACTATGCAG

(CT)8

232–276

MN170838

Kurobe_4219

F: ACGCATCGGACAGTCGTATT

R: CCGTGCAGAACCAAAGAAAT

(TC)8

276–306

MACPF domain-containing protein At4g24290 [Morus notabilis] XP_010087924.1

0

MN170829

  1. – denotes that no BlastX hits were found