Table 1 Overview of whole-genome sequence data files of six Iranian canids
From: Genome resequencing data for Iranian local dogs and wolves
Label | Name of data file/data set | File types(extension) | Data repository and identifier (DOI or accession number) |
|---|---|---|---|
Bioproject [24] | Whole genome resequencing of the Iranian native dogs and wolves | No file type | PRJCA00118 |
YPi2985_L4_1_clean.fq.gz YPi2985_L4_2_clean.fq.gz YPi2985_L5_1_clean.fq.gz YPi2985_L5_2_clean.fq.gz YPi2985_L7_1_clean.fq.gz YPi2985_L7_2_clean.fq.gz YPi2985_L8_1_clean.fq.gz YPi2985_L8_2_clean.fq.g | FASTQ (fq.gz) | NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042720 NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042721 NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042722 NGDC, Genome Sequence Archive | |
b_L3_1_clean.fq.gz b_L3_2_clean.fq.gz b_L4_1_clean.fq.gz b_L4_2_clean.fq.gz b_L6_1_clean.fq.gz b_L6_2_clean.fq.gz | FASTQ (fq.gz) | NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042724 NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042725 NGDC, Genome Sequence Archive | |
8-a_L5_1_clean.fq.gz 8-a_L5_2_clean.fq.gz 8-a_L6_1_clean.fq.gz 8-a_L6_2_clean.fq.gz 8-a_L8_1_clean.fq.gz 8-a_L8_2_clean.fq.gz | FASTQ (fq.gz) | NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042727 NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042728 NGDC, Genome Sequence Archive | |
74_L1_1_clean.fq.gz 74_L1_2_clean.fq.gz 74_L5_1_clean.fq.gz 74_L5_2_clean.fq.gz 74_L8_1_clean.fq.gz 74_L8_2_clean.fq.gz | FASTQ (fq.gz) | NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042730 NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042731 NGDC, Genome Sequence Archive | |
85_L5_1_clean.fq.gz 85_L5_2_clean.fq.gz 85_L6_1_clean.fq.gz 85_L6_2_clean.fq.gz 85_L7_1_clean.fq.gz 85_L7_2_clean.fq.gz 85_L8_1_clean.fq.gz 85_L8_2_clean.fq.gz | FASTQ (fq.gz) | NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042733 NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042734 NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042735 NGDC, Genome Sequence Archive | |
Data file 6 | 1 _L1_1_clean.fq.gz 1_L1_2_clean.fq.gz 1_L2_1_clean.fq.gz 1_L2_2_clean.fq.gz 1_L3_1_clean.fq.gz 1_L3_2_clean.fq.gz 1_L4_1_clean.fq.gz 1_L4_2_clean.fq.gz | FASTQ (fq.gz) | NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042737 NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042738 NGDC, Genome Sequence Archive https://bigd.big.ac.cn/gsa/browse/CRA001324/CRR042739 NGDC, Genome Sequence Archive |