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Table 2 DNA methylation sites among the peanut genotypes

From: DNA methylation and expression analyses reveal epialleles for the foliar disease resistance genes in peanut (Arachis hypogaea L.)

Sample

CpG

CHG

CHH

Total

Methylated

A genome

B genome

Total

Methylated

A genome

B genome

Total

Methylated

A genome

B genome

GPBD 4

31,663,874

29,848,251

11,760,065

18,008,152

40,177,586

29,880,544

11,830,612

17,993,870

178,935,382

17,048,983

6,943,821

10,069,256

VG 9514

32,445,817

30,288,901

11,894,773

18,308,727

41,293,914

31,080,870

12,268,953

18,752,614

183,452,039

14,960,448

6,065,417

8,862,905

ICGV 86855

27,943,111

27,130,352

10,527,102

16,531,496

35,387,700

27,135,584

10,558,531

16,526,472

154,386,730

16,169,355

6,494,227

9,642,136

ICGV 86699

32,688,192

31,020,240

12,102,494

18,834,402

41,574,466

30,412,911

11,916,546

18,438,880

185,674,761

15,272,420

6,163,282

9,076,921

ICGV 99005

34,477,649

32,005,405

12,535,802

19,383,213

43,710,526

31,146,419

12,268,603

18,818,636

195,930,475

15,652,170

6,327,998

9,290,176

TAG 24

33,202,174

31,011,515

12,158,655

18,759,336

42,196,978

31,731,452

12,523,754

19,143,967

189,327,602

15,792,267

6,399,209

9,357,840

TMV 2

28,363,522

26,892,267

10,583,517

16,237,332

35,841,706

27,819,425

10,976,169

16,792,106

154,808,095

14,332,418

5,806,056

8,498,122

JL 24

34,028,898

31,745,351

12,510,873

19,138,621

43,376,521

32,839,584

13,028,058

19,745,221

195,943,632

17,552,832

7,144,759

10,368,667

DER

32,905,294

30,853,653

12,146,023

18,614,509

41,859,554

31,309,671

12,408,504

18,838,577

187,027,809

15,772,260

6,415,665

9,321,787

VL 1

34,335,421

32,427,631

12,747,839

19,592,191

43,825,764

31,789,229

12,559,737

19,169,059

197,280,818

15,795,413

6,401,860

9,360,431

TMV 2-NLM

32,076,131

30,693,163

11,983,385

18,625,032

40,760,931

30,765,451

12,039,163

18,667,382

181,615,597

17,578,402

7,075,377

10,466,654