From: Generating long-read sequences using Oxford Nanopore Technology from Diospyros celebica genomic DNA
Label | Name of data file/data set | File types (extension) | Data repository and identifier (DOI or accession number) |
---|---|---|---|
Data file 1 | List of ebony samples and Nanopore Native barcodes | Compressed XLSX file (.zip) | |
Data file 2 | Raw reads statistics and plots (quality score, reads length, reads distribution) | Compressed TXT, PNG and HTML files (.zip) | |
Data file 3 | Polished De novo genome contig assemblies of both assembler | Compressed FASTA files (.zip) | |
Data file 4 | Statistics of corrected contig assemblies with Diospyros celebica chloroplast | Compressed PDF file (.zip) | |
Data file 5 | Statistics of corrected contig assemblies with Diospyros lotus genome | Compressed PDF file (.zip) | |
Data file 6 | Constructed scaffolds from both assembler | Compressed FASTA files (.zip) | |
Data file 7 | Statistics of scaffolds assemblies with Diospyros celebica chloroplast | Compressed PDF file (.zip) | |
Data file 8 | GenBank annotation from scaffolds assemblies | Compressed GB files (.zip) | |
Data file 9 | Annotation visualization from scaffolds assemblies | Compressed JPG files (.zip) | |
Data set 1 | Raw genomic DNA reads (trimmed barcode) | FASTQ files (.fastq) | DNA Data Base of Japan (DRP006615) https://identifiers.org/insdc.sra:DR006615 [22] |