TY - JOUR AU - Bangham, C. R. AU - Araujo, A. AU - Yamano, Y. AU - Taylor, G. P. PY - 2015 DA - 2015// TI - HTLV-1-associated myelopathy/tropical spastic paraparesis JO - Nat Rev Dis Prim VL - 1 UR - https://doi.org/10.1038/nrdp.2015.12 DO - 10.1038/nrdp.2015.12 ID - Bangham2015 ER - TY - JOUR AU - Bangham, C. R. AU - Ratner, L. PY - 2015 DA - 2015// TI - How does HTLV-1 cause adult T-cell leukaemia/lymphoma (ATL)? JO - Curr Opin Virol VL - 14 UR - https://doi.org/10.1016/j.coviro.2015.09.004 DO - 10.1016/j.coviro.2015.09.004 ID - Bangham2015 ER - TY - JOUR AU - Bangham, C. R. M. AU - Human, T. PY - 2018 DA - 2018// TI - Cell leukemia virus type 1: persistence and pathogenesis JO - Annu Rev Immunol VL - 36 UR - https://doi.org/10.1146/annurev-immunol-042617-053222 DO - 10.1146/annurev-immunol-042617-053222 ID - Bangham2018 ER - TY - JOUR AU - Leung, M. K. AU - Delong, A. AU - Alipanahi, B. AU - Frey, B. J. PY - 2016 DA - 2016// TI - Machine learning in genomic medicine: a review of computational problems and data sets JO - Proc IEEE VL - 104 UR - https://doi.org/10.1109/JPROC.2015.2494198 DO - 10.1109/JPROC.2015.2494198 ID - Leung2016 ER - TY - JOUR AU - Azimzadeh Jamalkandi, S. AU - Mozhgani, S. H. AU - Gholami Pourbadie, H. AU - Mirzaie, M. AU - Noorbakhsh, F. AU - Vaziri, B. PY - 2016 DA - 2016// TI - Systems biomedicine of rabies delineates the affected signaling pathways JO - Front Microbiol VL - 7 UR - https://doi.org/10.3389/fmicb.2016.01688 DO - 10.3389/fmicb.2016.01688 ID - Azimzadeh Jamalkandi2016 ER - TY - JOUR AU - Mozhgani, S. H. AU - Zarei-Ghobadi, M. AU - Teymoori-Rad, M. AU - Mokhtari-Azad, T. AU - Mirzaie, M. AU - Sheikhi, M. PY - 2018 DA - 2018// TI - Human T-lymphotropic virus 1 (HTLV-1) pathogenesis: a systems virology study JO - J Cell Biochem VL - 119 UR - https://doi.org/10.1002/jcb.26546 DO - 10.1002/jcb.26546 ID - Mozhgani2018 ER - TY - JOUR AU - Szklarczyk, D. AU - Franceschini, A. AU - Wyder, S. AU - Forslund, K. AU - Heller, D. AU - Huerta-Cepas, J. PY - 2014 DA - 2014// TI - STRING v10: protein–protein interaction networks, integrated over the tree of life JO - Nucleic Acids Res VL - 43 UR - https://doi.org/10.1093/nar/gku1003 DO - 10.1093/nar/gku1003 ID - Szklarczyk2014 ER - TY - STD TI - Diestel R. Graph theory. Grad Texts in Math. 2005;101. ID - ref8 ER - TY - JOUR AU - Yoon, J. AU - Blumer, A. AU - Lee, K. PY - 2006 DA - 2006// TI - An algorithm for modularity analysis of directed and weighted biological networks based on edge-betweenness centrality JO - Bioinformatics VL - 22 UR - https://doi.org/10.1093/bioinformatics/btl533 DO - 10.1093/bioinformatics/btl533 ID - Yoon2006 ER - TY - JOUR AU - Bastian, M. AU - Heymann, S. AU - Jacomy, M. PY - 2009 DA - 2009// TI - Gephi: an open source software for exploring and manipulating networks JO - Icwsm VL - 8 ID - Bastian2009 ER - TY - JOUR AU - Kuleshov, M. V. AU - Jones, M. R. AU - Rouillard, A. D. AU - Fernandez, N. F. AU - Duan, Q. AU - Wang, Z. PY - 2016 DA - 2016// TI - Enrichr: a comprehensive gene set enrichment analysis web server 2016 update JO - Nucleic Acids Res VL - 44 UR - https://doi.org/10.1093/nar/gkw377 DO - 10.1093/nar/gkw377 ID - Kuleshov2016 ER - TY - JOUR AU - Butler, J. E. AU - Kadonaga, J. T. PY - 2002 DA - 2002// TI - The RNA polymerase II core promoter: a key component in the regulation of gene expression JO - Genes Dev VL - 16 UR - https://doi.org/10.1101/gad.1026202 DO - 10.1101/gad.1026202 ID - Butler2002 ER - TY - JOUR AU - Yoshida, M. AU - Satou, Y. AU - Yasunaga, J. AU - Fujisawa, J. AU - Matsuoka, M. PY - 2008 DA - 2008// TI - Transcriptional control of spliced and unspliced human T-cell leukemia virus type 1 bZIP factor (HBZ) gene JO - J Virol VL - 82 UR - https://doi.org/10.1128/JVI.00242-08 DO - 10.1128/JVI.00242-08 ID - Yoshida2008 ER - TY - JOUR AU - Irby, R. B. AU - Yeatman, T. J. PY - 2000 DA - 2000// TI - Role of Src expression and activation in human cancer JO - Oncogene VL - 19 UR - https://doi.org/10.1038/sj.onc.1203912 DO - 10.1038/sj.onc.1203912 ID - Irby2000 ER - TY - JOUR AU - Migone, T. S. AU - Cacalano, N. A. AU - Taylor, N. AU - Yi, T. AU - Waldmann, T. A. AU - Johnston, J. A. PY - 1998 DA - 1998// TI - Recruitment of SH2-containing protein tyrosine phosphatase SHP-1 to the interleukin 2 receptor; loss of SHP-1 expression in human T-lymphotropic virus type I-transformed T cells JO - Proc Natl Acad Sci USA VL - 95 UR - https://doi.org/10.1073/pnas.95.7.3845 DO - 10.1073/pnas.95.7.3845 ID - Migone1998 ER - TY - JOUR AU - Uchiumi, F. AU - Semba, K. AU - Yamanashi, Y. AU - Fujisawa, J. AU - Yoshida, M. AU - Inoue, K. PY - 1992 DA - 1992// TI - Characterization of the promoter region of the src family gene lyn and its trans activation by human T-cell leukemia virus type I-encoded p40tax JO - Mol Cell Biol VL - 12 UR - https://doi.org/10.1128/MCB.12.9.3784 DO - 10.1128/MCB.12.9.3784 ID - Uchiumi1992 ER - TY - JOUR AU - Grassmann, R. AU - Aboud, M. AU - Jeang, K. -. T. PY - 2005 DA - 2005// TI - Molecular mechanisms of cellular transformation by HTLV-1 Tax JO - Oncogene VL - 24 UR - https://doi.org/10.1038/sj.onc.1208978 DO - 10.1038/sj.onc.1208978 ID - Grassmann2005 ER - TY - JOUR AU - Qiao, Y. AU - He, H. AU - Jonsson, P. AU - Sinha, I. AU - Zhao, C. AU - Dahlman-Wright, K. PY - 2016 DA - 2016// TI - AP-1 is a key regulator of proinflammatory cytokine TNFalpha-mediated triple-negative breast cancer progression JO - J Biol Chem VL - 291 UR - https://doi.org/10.1074/jbc.M115.702571 DO - 10.1074/jbc.M115.702571 ID - Qiao2016 ER - TY - JOUR AU - Boczek, T. AU - Lisek, M. AU - Ferenc, B. AU - Zylinska, L. PY - 2017 DA - 2017// TI - Cross talk among PMCA, calcineurin and NFAT transcription factors in control of calmodulin gene expression in differentiating PC12 cells JO - Biochem Biophys Acta VL - 1860 ID - Boczek2017 ER - TY - JOUR AU - Hironaka, N. AU - Mochida, K. AU - Mori, N. AU - Maeda, M. AU - Yamamoto, N. AU - Yamaoka, S. PY - 2004 DA - 2004// TI - Tax-independent constitutive IkappaB kinase activation in adult T-cell leukemia cells JO - Neoplasia VL - 6 UR - https://doi.org/10.1593/neo.03388 DO - 10.1593/neo.03388 ID - Hironaka2004 ER - TY - JOUR AU - Bai, D. AU - Ueno, L. AU - Vogt, P. K. PY - 2009 DA - 2009// TI - Akt-mediated regulation of NFkappaB and the essentialness of NFkappaB for the oncogenicity of PI3K and Akt JO - Int J Cancer VL - 125 UR - https://doi.org/10.1002/ijc.24748 DO - 10.1002/ijc.24748 ID - Bai2009 ER - TY - JOUR AU - Xia, H. AU - Nho, R. S. AU - Kahm, J. AU - Kleidon, J. AU - Henke, C. A. PY - 2004 DA - 2004// TI - Focal adhesion kinase is upstream of phosphatidylinositol 3-kinase/Akt in regulating fibroblast survival in response to contraction of type I collagen matrices via a beta 1 integrin viability signaling pathway JO - J Biol Chem VL - 279 UR - https://doi.org/10.1074/jbc.M313265200 DO - 10.1074/jbc.M313265200 ID - Xia2004 ER - TY - JOUR AU - Liyasova, M. S. AU - Ma, K. AU - Lipkowitz, S. PY - 2015 DA - 2015// TI - Molecular pathways: cbl proteins in tumorigenesis and antitumor immunity-opportunities for cancer treatment JO - Clin Cancer Res VL - 21 UR - https://doi.org/10.1158/1078-0432.CCR-13-2490 DO - 10.1158/1078-0432.CCR-13-2490 ID - Liyasova2015 ER - TY - JOUR AU - Kim, M. S. AU - Shutov, L. P. AU - Gnanasekaran, A. AU - Lin, Z. AU - Rysted, J. E. AU - Ulrich, J. D. PY - 2014 DA - 2014// TI - Nerve growth factor (NGF) regulates activity of nuclear factor of activated T-cells (NFAT) in neurons via the phosphatidylinositol 3-kinase (PI3K)-Akt-glycogen synthase kinase 3beta (GSK3beta) pathway JO - J Biol Chem VL - 289 UR - https://doi.org/10.1074/jbc.M114.587188 DO - 10.1074/jbc.M114.587188 ID - Kim2014 ER - TY - JOUR AU - Chou, W. Y. AU - Chuang, K. H. AU - Sun, D. AU - Lee, Y. H. AU - Kao, P. H. AU - Lin, Y. Y. PY - 2015 DA - 2015// TI - Inhibition of PKC-induced COX-2 and IL-8 expression in human breast cancer cells by glucosamine JO - J Cell Physiol VL - 230 UR - https://doi.org/10.1002/jcp.24955 DO - 10.1002/jcp.24955 ID - Chou2015 ER - TY - JOUR AU - Kondratyev, A. AU - Popova, O. AU - Severin, S. AU - Choladze, M. AU - Shmyrev, I. AU - Tubasheva, I. PY - 1990 DA - 1990// TI - Nerve growth factor stimulates protein kinase C translocation in PC12 cells JO - FEBS Lett VL - 264 UR - https://doi.org/10.1016/0014-5793(90)80768-E DO - 10.1016/0014-5793(90)80768-E ID - Kondratyev1990 ER - TY - JOUR AU - Rusanescu, G. AU - Gotoh, T. AU - Tian, X. AU - Feig, L. A. PY - 2001 DA - 2001// TI - Regulation of Ras signaling specificity by protein kinase C JO - Mol Cell Biol VL - 21 UR - https://doi.org/10.1128/MCB.21.8.2650-2658.2001 DO - 10.1128/MCB.21.8.2650-2658.2001 ID - Rusanescu2001 ER - TY - JOUR AU - Hoesel, B. AU - Schmid, J. A. PY - 2013 DA - 2013// TI - The complexity of NF-kappaB signaling in inflammation and cancer JO - Mol Cancer VL - 12 UR - https://doi.org/10.1186/1476-4598-12-86 DO - 10.1186/1476-4598-12-86 ID - Hoesel2013 ER - TY - JOUR AU - Manna, S. K. AU - Ramesh, G. T. PY - 2005 DA - 2005// TI - Interleukin-8 induces nuclear transcription factor-kappaB through a TRAF6-dependent pathway JO - J Biol Chem VL - 280 UR - https://doi.org/10.1074/jbc.M410994200 DO - 10.1074/jbc.M410994200 ID - Manna2005 ER - TY - JOUR AU - Ahn, S. H. AU - Park, H. AU - Ahn, Y. H. AU - Kim, S. AU - Cho, M. S. AU - Kang, J. L. PY - 2016 DA - 2016// TI - Necrotic cells influence migration and invasion of glioblastoma via NF-kappaB/AP-1-mediated IL-8 regulation JO - Sci Rep VL - 6 UR - https://doi.org/10.1038/srep24552 DO - 10.1038/srep24552 ID - Ahn2016 ER - TY - JOUR AU - Lim, J. W. AU - Kim, H. AU - Kim, K. H. PY - 2001 DA - 2001// TI - Nuclear factor-kappaB regulates cyclooxygenase-2 expression and cell proliferation in human gastric cancer cells JO - Lab Investig J Tech Methods Pathol VL - 81 UR - https://doi.org/10.1038/labinvest.3780243 DO - 10.1038/labinvest.3780243 ID - Lim2001 ER - TY - JOUR AU - Arias-Salvatierra, D. AU - Silbergeld, E. K. AU - Acosta-Saavedra, L. C. AU - Calderon-Aranda, E. S. PY - 2011 DA - 2011// TI - Role of nitric oxide produced by iNOS through NF-kappaB pathway in migration of cerebellar granule neurons induced by Lipopolysaccharide JO - Cell Signal VL - 23 UR - https://doi.org/10.1016/j.cellsig.2010.10.017 DO - 10.1016/j.cellsig.2010.10.017 ID - Arias-Salvatierra2011 ER - TY - JOUR AU - Jafarian, M. AU - Mozhgani, S. H. AU - Patrad, E. AU - Vaziri, H. AU - Rezaee, S. A. AU - Akbarin, M. M. PY - 2017 DA - 2017// TI - Evaluation of INOS, ICAM-1, and VCAM-1 gene expression: a study of adult T cell leukemia malignancy associated with HTLV-1 JO - Adv Virol VL - 162 ID - Jafarian2017 ER - TY - JOUR AU - Whibley, C. AU - Pharoah, P. D. P. AU - Hollstein, M. PY - 2009 DA - 2009// TI - p53 polymorphisms: cancer implications JO - Nat Rev Cancer VL - 9 UR - https://doi.org/10.1038/nrc2584 DO - 10.1038/nrc2584 ID - Whibley2009 ER - TY - JOUR AU - Tawara, M. AU - Hogerzeil, S. J. AU - Yamada, Y. AU - Takasaki, Y. AU - Soda, H. AU - Hasegawa, H. PY - 2006 DA - 2006// TI - Impact of p53 aberration on the progression of adult T-cell leukemia/lymphoma JO - Cancer Lett VL - 234 UR - https://doi.org/10.1016/j.canlet.2005.03.039 DO - 10.1016/j.canlet.2005.03.039 ID - Tawara2006 ER - TY - JOUR AU - Adorno, M. AU - Cordenonsi, M. AU - Montagner, M. AU - Dupont, S. AU - Wong, C. AU - Hann, B. PY - 2009 DA - 2009// TI - A mutant-p53/Smad complex opposes p63 to empower TGFbeta-induced metastasis JO - Cell VL - 137 UR - https://doi.org/10.1016/j.cell.2009.01.039 DO - 10.1016/j.cell.2009.01.039 ID - Adorno2009 ER - TY - JOUR AU - Ichimura, K. AU - Bolin, M. B. AU - Goike, H. M. AU - Schmidt, E. E. AU - Moshref, A. AU - Collins, V. P. PY - 2000 DA - 2000// TI - Deregulation of the p14ARF/MDM2/p53 pathway is a prerequisite for human astrocytic gliomas with G1-S transition control gene abnormalities JO - Can Res VL - 60 ID - Ichimura2000 ER - TY - JOUR AU - Jacobsen, J. A. AU - Woodard, J. AU - Kee, B. L. PY - 2016 DA - 2016// TI - EZH2 regulates cell cycle and survival in B and T lymphocyte progenitors JO - Am Assoc Immnol VL - 196 ID - Jacobsen2016 ER - TY - JOUR AU - Shetty, S. AU - Shetty, P. AU - Idell, S. AU - Velusamy, T. AU - Bhandary, Y. P. AU - Shetty, R. S. PY - 2008 DA - 2008// TI - Regulation of plasminogen activator inhibitor-1 expression by tumor suppressor protein p53 JO - J Biol Chem VL - 283 UR - https://doi.org/10.1074/jbc.M710268200 DO - 10.1074/jbc.M710268200 ID - Shetty2008 ER - TY - JOUR AU - Baron, V. AU - Adamson, E. D. AU - Calogero, A. AU - Ragona, G. AU - Mercola, D. PY - 2006 DA - 2006// TI - The transcription factor Egr1 is a direct regulator of multiple tumor suppressors including TGFbeta1, PTEN, p53, and fibronectin JO - Cancer Gene Ther VL - 13 UR - https://doi.org/10.1038/sj.cgt.7700896 DO - 10.1038/sj.cgt.7700896 ID - Baron2006 ER - TY - JOUR AU - Liu, B. AU - Bao, P. AU - Zhou, B. AU - Chen, K. AU - Wang, R. AU - Hu, T. PY - 2011 DA - 2011// TI - New role of Tlr4 as a mediator for inflammation-apoptosis signaling pathway in necrotizing enterocolitis JO - Pediatr Res VL - 70 UR - https://doi.org/10.1038/pr.2011.362 DO - 10.1038/pr.2011.362 ID - Liu2011 ER - TY - JOUR AU - Avalle, L. AU - Camporeale, A. AU - Camperi, A. AU - Poli, V. PY - 2017 DA - 2017// TI - STAT3 in cancer: a double edged sword JO - Cytokine VL - 98 UR - https://doi.org/10.1016/j.cyto.2017.03.018 DO - 10.1016/j.cyto.2017.03.018 ID - Avalle2017 ER - TY - JOUR AU - Elsen, P. J. AU - Holling, T. M. AU - Kuipers, H. F. AU - Stoep, N. PY - 2004 DA - 2004// TI - Transcriptional regulation of antigen presentation JO - Curr Opin Immunol VL - 16 UR - https://doi.org/10.1016/j.coi.2003.11.015 DO - 10.1016/j.coi.2003.11.015 ID - Elsen2004 ER - TY - JOUR AU - Aliprantis, A. O. AU - Yang, R. B. AU - Weiss, D. S. AU - Godowski, P. AU - Zychlinsky, A. PY - 2000 DA - 2000// TI - The apoptotic signaling pathway activated by Toll-like receptor-2 JO - EMBO J VL - 19 UR - https://doi.org/10.1093/emboj/19.13.3325 DO - 10.1093/emboj/19.13.3325 ID - Aliprantis2000 ER - TY - JOUR AU - Li, C. AU - Che, L. H. AU - Ji, T. F. AU - Shi, L. AU - Yu, J. L. PY - 2017 DA - 2017// TI - Effects of the TLR4 signaling pathway on apoptosis of neuronal cells in diabetes mellitus complicated with cerebral infarction in a rat model JO - Sci Rep VL - 7 UR - https://doi.org/10.1038/srep43834 DO - 10.1038/srep43834 ID - Li2017 ER -