Table 1 Overview of data files/data sets
From: Transcriptome of Aquilaria malaccensis containing agarwood formed naturally and induced artificially
Label | Name of data file/data set | File types (file extension) | Data repository and identifier (DOI or accession number) |
|---|---|---|---|
Data set 1 | RNA-Seq of healthy trunk tissue of Aquilaria malaccensis | fastq file (.fastq) | NCBI sequence read archive (https://identifiers.org/insdc.sra:SRR8863603) [31] |
Data set 2 | RNA-Seq of naturally induced agarwood from trunk tissue of Aquilaria malaccensis | fastq file (.fastq) | NCBI sequence read archive (https://identifiers.org/insdc.sra:SRR8863602) [32] |
Data set 3 | RNA-Seq of synthetically induced agarwood from trunk tissue of Aquilaria malaccensis | fastq file (.fastq) | NCBI sequence read archive (https://identifiers.org/insdc.sra:SRR8863604) [33] |
Data set 4 | TSA: Aquilaria malaccensis, transcriptome shotgun assembly | Entry note | NCBI Sequence Read Archive https://identifiers.org/ncbi/insdc:GHJS00000000.1 [34] |
Data file 1 | Schematic overview of the study | Image file (.tiff) | Figshare (https://doi.org/10.6084/m9.figshare.13417400.v2) [35] |
Data file 2 | Comparison of functional annotations for Aquilaria malaccensis unigenes against different databases | Image file (.tiff) | Figshare (https://doi.org/10.6084/m9.figshare.13417400.v2) [35] |
Data file 3 | Functional classifications of Aquilaria malaccensis unigenes | Image file (.tiff) | Figshare (https://doi.org/10.6084/m9.figshare.13417400.v2) [35] |
Data file 4 | Most enriched KEGG pathways for A. malaccensis differentially expressed genes | Document file (.docx) | Figshare (https://doi.org/10.6084/m9.figshare.13417400.v2) [35] |
Data file 5 | Summary statistics for transcriptome assembly and annotations sequencing results for Aquilaria malaccensis | Document file (.docx) | Figshare (https://doi.org/10.6084/m9.figshare.13417400.v2) [35] |
Data file 6 | Summary of gene functional annotations for Aquilaria malaccensis unigenes | Document file (.docx) | Figshare (https://doi.org/10.6084/m9.figshare.13417400.v2) [35] |
Data file 7 | BUSCO analysis of assembly completeness | Document file (.docx) | Figshare (https://doi.org/10.6084/m9.figshare.13417400.v2) [35] |
Data file 8 | Comparison of transcriptome assembly and annotation statistics for Aquilaria spp. | Document file (.docx) | Figshare (https://doi.org/10.6084/m9.figshare.13417400.v2) [35] |